############# Start of Description of junction: j55 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS6HS2 FINGERPRINT = 24:45:62:147:149:154 LOOP_LENGTH_SUM = 9 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1973 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1973 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1972 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1972 S3_SQ2 = CUUAAGGU S3_SQLEN2 = 8 S3_SQ = UCUUAAGGUA S3_SQLEN = 10 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2009 S4_NAME_ID3 = 2014 S4_NUM_ID5_ORIG = 2009 S4_NUM_ID3_ORIG = 2014 S4_NAME2_ID5 = 2010 S4_NAME2_ID3 = 2013 S4_NUM2_ID5_ORIG = 2010 S4_NUM2_ID3_ORIG = 2013 S4_SQ2 = AAUG S4_SQLEN2 = 4 S4_SQ = GAAUGG S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 115.36075191298364 H1_P_Y = 114.5772030551284 H1_P_Z = 89.0669315028496 # Orientation: H1_DX_X = 0.7174510016521367 H1_DX_Y = -0.4917682649891759 H1_DX_Z = 0.49338426583939565 H1_DY_X = -0.5480111175525337 H1_DY_Y = -0.8356930051548233 H1_DY_Z = -0.036069601801600015 H1_DZ_X = 0.4300556653122527 H1_DZ_Y = -0.24450189096373265 H1_DZ_Z = -0.8690632600956008 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 117.80898944404103 H2_P_Y = 100.06395815946988 H2_P_Z = 103.61711412897382 # Orientation: H2_DX_X = -0.9806421492839803 H2_DX_Y = -0.14808593780294643 H2_DX_Z = 0.12810749420981438 H2_DY_X = 0.15983709733390583 H2_DY_Y = -0.9833141154876301 H2_DY_Z = 0.08686456468923609 H2_DZ_X = 0.11310648683240743 H2_DZ_Y = 0.10565938343468417 H2_DZ_Z = 0.9879488940874523 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 10 H3_INID2 = 2 H3_OUTID2 = 9 H3_INID2_ORIG = 2010 H3_OUTID2_ORIG = 1972 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.867702052664 H3_P_Y = 113.72404468002755 H3_P_Z = 105.70226546495844 # Orientation: H3_DX_X = 0.8719451153782813 H3_DX_Y = 0.44843896017161455 H3_DX_Z = -0.19650499934647314 H3_DY_X = -0.4877153314421605 H3_DY_Y = 0.7603381101438629 H3_DY_Z = -0.42897519012075236 H3_DZ_X = -0.04295894836023706 H3_DZ_Y = 0.46988132253056847 H3_DZ_Z = 0.8816836572675584 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1889 H4_OUTID2_ORIG = 2013 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 114.6958692923701 H4_P_Y = 130.2686185817421 H4_P_Z = 93.22449155739723 # Orientation: H4_DX_X = -0.29628821234419433 H4_DX_Y = -0.8273247064221607 H4_DX_Z = 0.47722858817276403 H4_DY_X = 0.6597419044194055 H4_DY_Y = 0.18401686423518981 H4_DY_Z = 0.7286140358448279 H4_DZ_X = -0.6906185016193263 H4_DZ_Y = 0.5307274477738417 H4_DZ_Z = 0.4912987496427519 ############# END of Description of junction: j55