#############  Start of Description of junction: j42
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS7HS8HS8HS9HS11
FINGERPRINT = 21:26:27:45:110:129:131:152:155:171
LOOP_LENGTH_SUM = 43
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2479
S1_NAME_ID3 = 2492
S1_NUM_ID5_ORIG =  2479
S1_NUM_ID3_ORIG = 2492
S1_NAME2_ID5 =  2481
S1_NAME2_ID3 = 2490
S1_NUM2_ID5_ORIG =  2481
S1_NUM2_ID3_ORIG = 2490
S1_SQ2 = GGAUAACAGA
S1_SQLEN2 = 10
S1_SQ = AGGGAUAACAGAGU
S1_SQLEN = 14
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  2093
S2_NAME_ID3 = 2107
S2_NUM_ID5_ORIG =  2093
S2_NUM_ID3_ORIG = 2107
S2_NAME2_ID5 =  2095
S2_NAME2_ID3 = 2105
S2_NUM2_ID5_ORIG =  2095
S2_NUM2_ID3_ORIG = 2105
S2_SQ2 = AAGCGAAGACC
S2_SQLEN2 = 11
S2_SQ = GGAAGCGAAGACCCU
S2_SQLEN = 15
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  2529
S3_NAME_ID3 = 2545
S3_NUM_ID5_ORIG =  2529
S3_NUM_ID3_ORIG = 2545
S3_NAME2_ID5 =  2531
S3_NAME2_ID3 = 2543
S3_NUM2_ID5_ORIG =  2531
S3_NUM2_ID3_ORIG = 2543
S3_SQ2 = UACCUCGAUGUCG
S3_SQLEN2 = 13
S3_SQ = GCUACCUCGAUGUCGGU
S3_SQLEN = 17
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  2613
S4_NAME_ID3 = 2625
S4_NUM_ID5_ORIG =  2613
S4_NUM_ID3_ORIG = 2625
S4_NAME2_ID5 =  2615
S4_NAME2_ID3 = 2623
S4_NUM2_ID5_ORIG =  2615
S4_NUM2_ID3_ORIG = 2623
S4_SQ2 = UGGGUUUAG
S4_SQLEN2 = 9
S4_SQ = GCUGGGUUUAGAC
S4_SQLEN = 13
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  2639
S5_NAME_ID3 = 2652
S5_NUM_ID5_ORIG =  2639
S5_NUM_ID3_ORIG = 2652
S5_NAME2_ID5 =  2641
S5_NAME2_ID3 = 2650
S5_NUM2_ID5_ORIG =  2641
S5_NUM2_ID3_ORIG = 2650
S5_SQ2 = CGGCUGCUAU
S5_SQLEN2 = 10
S5_SQ = GUCGGCUGCUAUCU
S5_SQLEN = 14
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 15
H1_INID2 = 3
H1_OUTID2 = 13
H1_INID2_ORIG = 2481
H1_OUTID2_ORIG = 2105
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 71.48645943753044
H1_P_Y = 114.42885519998427
H1_P_Z = 83.47836899488327
# Orientation:
H1_DX_X = -0.3596659144577927
H1_DX_Y = -0.8961828625672581
H1_DX_Z = 0.25980128332628283
H1_DY_X = -0.6848950453656357
H1_DY_Y = 0.06446642927899404
H1_DY_Z = -0.7257843042733896
H1_DZ_X = 0.6336869943519758
H1_DZ_Y = -0.4389764872254176
H1_DZ_Z = -0.6369775795523651
## Properties of helix 2
H2_INID = 1
H2_OUTID = 14
H2_INID2 = 3
H2_OUTID2 = 12
H2_INID2_ORIG = 2531
H2_OUTID2_ORIG = 2490
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 64.1647485376744
H2_P_Y = 109.49999266628541
H2_P_Z = 115.90458761424992
# Orientation:
H2_DX_X = -0.5968444603557117
H2_DX_Y = -0.7953516026083207
H2_DX_Z = -0.10579469916342532
H2_DY_X = 0.8003946330650109
H2_DY_Y = -0.5994025726109413
H2_DY_Z = -0.009218856117868768
H2_DZ_X = -0.0560813828595883
H2_DZ_Y = -0.09017973262189116
H2_DZ_Z = 0.9943452591131461
## Properties of helix 3
H3_INID = 1
H3_OUTID = 17
H3_INID2 = 3
H3_OUTID2 = 15
H3_INID2_ORIG = 2615
H3_OUTID2_ORIG = 2543
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 64.98395593549235
H3_P_Y = 131.6805784648467
H3_P_Z = 114.35279128750119
# Orientation:
H3_DX_X = 0.7406670698147053
H3_DX_Y = 0.5416367537436884
H3_DX_Z = 0.3975448637400518
H3_DY_X = -0.45771456679705125
H3_DY_Y = 0.8399244293462118
H3_DY_Z = -0.29158931449764225
H3_DZ_X = -0.4918431325472312
H3_DZ_Y = 0.03400852806908006
H3_DZ_Z = 0.8700193980508146
## Properties of helix 4
H4_INID = 1
H4_OUTID = 13
H4_INID2 = 3
H4_OUTID2 = 11
H4_INID2_ORIG = 2641
H4_OUTID2_ORIG = 2623
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 91.4139081739194
H4_P_Y = 120.37718813552463
H4_P_Z = 94.64833591326415
# Orientation:
H4_DX_X = 0.7140808744602936
H4_DX_Y = 0.6937016019851399
H4_DX_Z = -0.0941625835099984
H4_DY_X = 0.32658755203596
H4_DY_Y = -0.21112732062481143
H4_DY_Z = 0.921284877408155
H4_DZ_X = 0.6192165013831357
H4_DZ_Y = -0.6886242385285755
H4_DZ_Z = -0.3773162897699649
## Properties of helix 5
H5_INID = 1
H5_OUTID = 14
H5_INID2 = 3
H5_OUTID2 = 12
H5_INID2_ORIG = 2095
H5_OUTID2_ORIG = 2650
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 48.993143319578564
H5_P_Y = 141.71733284316846
H5_P_Z = 107.87932019935732
# Orientation:
H5_DX_X = -0.7518329219652813
H5_DX_Y = -0.6498443393410582
H5_DX_Z = -0.11157774005386045
H5_DY_X = 0.4196785851579179
H5_DY_Y = -0.6021576930221499
H5_DY_Z = 0.6791730250047436
H5_DZ_X = -0.508544140275923
H5_DZ_Y = 0.46379785182838873
H5_DZ_Z = 0.7254477307362635
#############  END of Description of junction: j42