############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:40:42:42:61:64:64:76:91:101:102:105:119:125:130:131:134:143:143:158:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = A ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 58.121422778919495 H1_P_Y = 92.59810606884113 H1_P_Z = 81.32975358765444 # Orientation: H1_DX_X = 0.14750475895300497 H1_DX_Y = -0.9828227081943055 H1_DX_Z = 0.11091379690472536 H1_DY_X = 0.2445445143735796 H1_DY_Y = -0.07241834553960302 H1_DY_Z = -0.966929968363317 H1_DZ_X = 0.9583529238104305 H1_DZ_Y = 0.16975013250926452 H1_DZ_Z = 0.2296618512881139 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 41.21067002005566 H2_P_Y = 84.54070979411705 H2_P_Z = 71.26579079138608 # Orientation: H2_DX_X = -0.41944577439821273 H2_DX_Y = 0.43381917451863217 H2_DX_Z = 0.7974121683041062 H2_DY_X = -0.3468058163754648 H2_DY_Y = 0.7352099571053543 H2_DY_Z = -0.5824019614504152 H2_DZ_X = -0.8389225042086039 H2_DZ_Y = -0.5208332197480416 H2_DZ_Z = -0.15792969682506453 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 47.77691401141244 H3_P_Y = 90.57358505824298 H3_P_Z = 98.28241537981708 # Orientation: H3_DX_X = -0.21344688895587183 H3_DX_Y = 0.9184969767050148 H3_DX_Z = 0.33287194141114185 H3_DY_X = -0.7588308030469619 H3_DY_Y = -0.3704695550709687 H3_DY_Z = 0.5356567194693014 H3_DZ_X = 0.615317997414472 H3_DZ_Y = -0.13825922229378307 H3_DZ_Z = 0.7760593724120355 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 33.1817574810171 H4_P_Y = 103.03191175431216 H4_P_Z = 104.45558070764451 # Orientation: H4_DX_X = -0.9827224758433033 H4_DX_Y = 0.16585322548296233 H4_DX_Z = 0.08215377696308224 H4_DY_X = -0.038413254325945445 H4_DY_Y = -0.6169698580213208 H4_DY_Z = 0.7860487365203568 H4_DZ_X = 0.18105512244753186 H4_DZ_Y = 0.7693119665584618 H4_DZ_Z = 0.6126811085266723 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 12.470676007717874 H5_P_Y = 98.20578067800288 H5_P_Z = 94.57504997114953 # Orientation: H5_DX_X = -0.14391792172191842 H5_DX_Y = 0.9300615390664291 H5_DX_Z = -0.33804314126547297 H5_DY_X = -0.9742294479650511 H5_DY_Y = -0.07320817672841429 H5_DY_Z = 0.2133484135816559 H5_DZ_X = 0.17367963186555357 H5_DZ_Y = 0.36003624318877314 H5_DZ_Z = 0.9166293084260104 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 10.383819493729273 H6_P_Y = 91.0721967229063 H6_P_Z = 73.37827972909565 # Orientation: H6_DX_X = 0.7067095880351619 H6_DX_Y = -0.6611530307679487 H6_DX_Z = 0.25186946636209484 H6_DY_X = -0.7040033647947084 H6_DY_Y = -0.6925120770746389 H6_DY_Z = 0.15750011258251106 H6_DZ_X = 0.07029097052188149 H6_DZ_Y = -0.28862379148662853 H6_DZ_Z = -0.9548588830036522 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = A H7_OUTSEQ_CHAR = A # Position: H7_P_X = 31.26618635114935 H7_P_Y = 100.85230957823899 H7_P_Z = 78.05833057316424 # Orientation: H7_DX_X = 0.9616330730155909 H7_DX_Y = -0.22340637619589643 H7_DX_Z = -0.15922130497396836 H7_DY_X = -0.26862519642910243 H7_DY_Y = -0.8846248943573443 H7_DY_Z = -0.3811552178925126 H7_DZ_X = -0.05569862409450721 H7_DZ_Y = 0.40930231780222925 H7_DZ_Z = -0.9106971373160775 ############# END of Description of junction: j13