#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 10:73:78:78:87:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 45.69650459661937
H1_P_Y = 127.32180496722239
H1_P_Z = 37.4566989470753
# Orientation:
H1_DX_X = -0.19176693683174761
H1_DX_Y = -0.9262670104666029
H1_DX_Z = 0.32443006528287555
H1_DY_X = -0.5775925836444102
H1_DY_Y = -0.16074415748796866
H1_DY_Z = -0.8003425036523026
H1_DZ_X = 0.7934810957150376
H1_DZ_Y = -0.3408676299603144
H1_DZ_Z = -0.5041795410249108
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.603897245236766
H2_P_Y = 144.05676837434825
H2_P_Z = 56.09756457831425
# Orientation:
H2_DX_X = -0.644282446453488
H2_DX_Y = 0.4299374202925037
H2_DX_Z = 0.6324981769334244
H2_DY_X = 0.24726587114641063
H2_DY_Y = -0.6655048662330785
H2_DY_Z = 0.7042463077548149
H2_DZ_X = 0.7237124554393972
H2_DZ_Y = 0.6101287467840848
H2_DZ_Z = 0.32246425257627465
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.670784709059973
H3_P_Y = 171.57774957824984
H3_P_Z = 66.29148318147719
# Orientation:
H3_DX_X = -0.7147517037036053
H3_DX_Y = 0.6807344801657109
H3_DX_Z = -0.16040751094112693
H3_DY_X = -0.3597985222519817
H3_DY_Y = -0.16122732113765892
H3_DY_Z = 0.9189944364924401
H3_DZ_X = 0.5997291267214635
H3_DZ_Y = 0.7145672245718515
H3_DZ_Z = 0.3601647624763018
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 28.087109407792504
H4_P_Y = 141.79956411706956
H4_P_Z = 69.28841253910291
# Orientation:
H4_DX_X = -0.7726819093490462
H4_DX_Y = -0.6242997849036556
H4_DX_Z = -0.11494540240461504
H4_DY_X = 0.581598961004584
H4_DY_Y = -0.7687899268936462
H4_DY_Z = 0.2659035480493941
H4_DZ_X = -0.25437239536377376
H4_DZ_Y = 0.1386067345987101
H4_DZ_Z = 0.9571221748558401
#############  END of Description of junction: j1