############# Start of Description of junction: j43 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 20:27:29:46:110:128:131:151:156:172 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2479 S1_NAME_ID3 = 2492 S1_NUM_ID5_ORIG = 2479 S1_NUM_ID3_ORIG = 2492 S1_NAME2_ID5 = 2481 S1_NAME2_ID3 = 2490 S1_NUM2_ID5_ORIG = 2481 S1_NUM2_ID3_ORIG = 2490 S1_SQ2 = GGAUAACAGA S1_SQLEN2 = 10 S1_SQ = AGGGAUAACAGAGU S1_SQLEN = 14 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2093 S2_NAME_ID3 = 2107 S2_NUM_ID5_ORIG = 2093 S2_NUM_ID3_ORIG = 2107 S2_NAME2_ID5 = 2095 S2_NAME2_ID3 = 2105 S2_NUM2_ID5_ORIG = 2095 S2_NUM2_ID3_ORIG = 2105 S2_SQ2 = AAGCGAAGACC S2_SQLEN2 = 11 S2_SQ = GGAAGCGAAGACCCU S2_SQLEN = 15 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2529 S3_NAME_ID3 = 2545 S3_NUM_ID5_ORIG = 2529 S3_NUM_ID3_ORIG = 2545 S3_NAME2_ID5 = 2531 S3_NAME2_ID3 = 2543 S3_NUM2_ID5_ORIG = 2531 S3_NUM2_ID3_ORIG = 2543 S3_SQ2 = UACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GCUACCUCGAUGUCGGU S3_SQLEN = 17 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2613 S4_NAME_ID3 = 2625 S4_NUM_ID5_ORIG = 2613 S4_NUM_ID3_ORIG = 2625 S4_NAME2_ID5 = 2615 S4_NAME2_ID3 = 2623 S4_NUM2_ID5_ORIG = 2615 S4_NUM2_ID3_ORIG = 2623 S4_SQ2 = UGGGUUUAG S4_SQLEN2 = 9 S4_SQ = GCUGGGUUUAGAC S4_SQLEN = 13 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 2639 S5_NAME_ID3 = 2652 S5_NUM_ID5_ORIG = 2639 S5_NUM_ID3_ORIG = 2652 S5_NAME2_ID5 = 2641 S5_NAME2_ID3 = 2650 S5_NUM2_ID5_ORIG = 2641 S5_NUM2_ID3_ORIG = 2650 S5_SQ2 = CGGCUGCUAU S5_SQLEN2 = 10 S5_SQ = GUCGGCUGCUAUCU S5_SQLEN = 14 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 2481 H1_OUTID2_ORIG = 2105 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 71.3783510790252 H1_P_Y = 113.3560853240818 H1_P_Z = 83.11282600256838 # Orientation: H1_DX_X = -0.38539986593632136 H1_DX_Y = -0.8825141819593796 H1_DX_Z = 0.26951004058629735 H1_DY_X = -0.6814307286130372 H1_DY_Y = 0.07526143528302498 H1_DY_Z = -0.7280026637733101 H1_DZ_X = 0.6221889628064332 H1_DZ_Y = -0.4642245523447741 H1_DZ_Z = -0.630378029092185 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 14 H2_INID2 = 3 H2_OUTID2 = 12 H2_INID2_ORIG = 2531 H2_OUTID2_ORIG = 2490 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 63.8086977323258 H2_P_Y = 108.80693094297075 H2_P_Z = 115.74955650980827 # Orientation: H2_DX_X = -0.5807130876864051 H2_DX_Y = -0.807150143505865 H2_DX_Z = -0.10621184316347865 H2_DY_X = 0.812338465612001 H2_DY_Y = -0.5830960378842889 H2_DY_Z = -0.010258064670850331 H2_DZ_X = -0.05365190655382435 H2_DZ_Y = -0.09223695811392929 H2_DZ_Z = 0.9942906096715518 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 17 H3_INID2 = 3 H3_OUTID2 = 15 H3_INID2_ORIG = 2615 H3_OUTID2_ORIG = 2543 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 64.84208482809404 H3_P_Y = 130.51900168816843 H3_P_Z = 114.08026137044571 # Orientation: H3_DX_X = 0.7201035283200099 H3_DX_Y = 0.5472980000076291 H3_DX_Z = 0.42651589382894883 H3_DY_X = -0.4566530155991444 H3_DY_Y = 0.8366190263882061 H3_DY_Z = -0.30255020745237005 H3_DZ_X = -0.5224164352748488 H3_DZ_Y = 0.02309770276244194 H3_DZ_Z = 0.8523775948966659 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2641 H4_OUTID2_ORIG = 2623 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 91.39714241959528 H4_P_Y = 119.58136265368043 H4_P_Z = 94.8763165522983 # Orientation: H4_DX_X = 0.7197806419830783 H4_DX_Y = 0.6879667136888372 H4_DX_Z = -0.09283118162885273 H4_DY_X = 0.3236516892102941 H4_DY_Y = -0.21426221092423248 H4_DY_Z = 0.9215971403173882 H4_DZ_X = 0.6141379417506698 H4_DZ_Y = -0.6933927500529791 H4_DZ_Z = -0.37688338073760974 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 2095 H5_OUTID2_ORIG = 2650 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 48.72084960191454 H5_P_Y = 140.84055275388152 H5_P_Z = 107.46918931086677 # Orientation: H5_DX_X = -0.7425641091161879 H5_DX_Y = -0.6637556993937608 H5_DX_Z = -0.08959305427768527 H5_DY_X = 0.43585973544846013 H5_DY_Y = -0.5804516214921875 H5_DY_Z = 0.6878242552584766 H5_DZ_X = -0.5085517032389859 H5_DZ_Y = 0.4717036003990245 H5_DZ_Z = 0.7203269247385578 ############# END of Description of junction: j43