#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 77:90:94:100:165:166
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 27
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 27
S1_NAME2_ID5 =  25
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  25
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = CA
S1_SQLEN2 = 2
S1_SQ = GCAC
S1_SQLEN = 4
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  6
S2_NAME_ID3 = 11
S2_NUM_ID5_ORIG =  6
S2_NUM_ID3_ORIG = 11
S2_NAME2_ID5 =  7
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  7
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = AUCG
S2_SQLEN2 = 4
S2_SQ = UAUCGC
S2_SQLEN = 6
S2_CHAR = B
## Properties of strand 3
S3_NAME_ID5 =  43
S3_NAME_ID3 = 50
S3_NUM_ID5_ORIG =  43
S3_NUM_ID3_ORIG = 50
S3_NAME2_ID5 =  44
S3_NAME2_ID3 = 49
S3_NUM2_ID5_ORIG =  44
S3_NUM2_ID3_ORIG = 49
S3_SQ2 = CAUUCC
S3_SQLEN2 = 6
S3_SQ = GCAUUCCG
S3_SQLEN = 8
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  64
S4_NAME_ID3 = 67
S4_NUM_ID5_ORIG =  64
S4_NUM_ID3_ORIG = 67
S4_NAME2_ID5 =  65
S4_NAME2_ID3 = 66
S4_NUM2_ID5_ORIG =  65
S4_NUM2_ID3_ORIG = 66
S4_SQ2 = GU
S4_SQLEN2 = 2
S4_SQ = CGUA
S4_SQLEN = 4
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 25
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 19.93841002389844
H1_P_Y = 19.198372185294506
H1_P_Z = 29.518074538010683
# Orientation:
H1_DX_X = 0.9742438258802792
H1_DX_Y = -0.09490194874696556
H1_DX_Z = 0.20455460849900575
H1_DY_X = 0.20244811408861452
H1_DY_Y = -0.031421167345470735
H1_DY_Z = -0.9787887776965007
H1_DZ_X = 0.09931630699999516
H1_DZ_Y = 0.9949906182304815
H1_DZ_Z = -0.011399157741116994
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 44
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 17.55281424654182
H2_P_Y = 6.099350930447379
H2_P_Z = 24.98903835016503
# Orientation:
H2_DX_X = 0.6930911051478397
H2_DX_Y = 0.08095050791583791
H2_DX_Z = 0.716290259066195
H2_DY_X = -0.7072503505147267
H2_DY_Y = -0.11574185625154865
H2_DY_Z = 0.6974243789890338
H2_DZ_X = 0.13936162191127366
H2_DZ_Y = -0.9899751703854065
H2_DZ_Z = -0.022967375963428793
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 2
H3_OUTID2 = 7
H3_INID2_ORIG = 65
H3_OUTID2_ORIG = 49
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 20.633362180767058
H3_P_Y = 38.41357154731495
H3_P_Z = 36.99851474260971
# Orientation:
H3_DX_X = 0.1334631288995176
H3_DX_Y = -0.6949924140653536
H3_DX_Z = 0.7065218592626579
H3_DY_X = 0.022634272948600653
H3_DY_Y = 0.7148512038922377
H3_DY_Z = 0.6989101844886108
H3_DZ_X = -0.9907952780026967
H3_DZ_Y = -0.07728713143488619
H3_DZ_Z = 0.11113692636620698
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 7
H4_OUTID2_ORIG = 66
H4_INSEQ_CHAR = B
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 34.75896845192166
H4_P_Y = 39.29970283771681
H4_P_Z = 36.32475232792827
# Orientation:
H4_DX_X = -0.13107204162651698
H4_DX_Y = -0.7846083557404597
H4_DX_Z = 0.6059784220631173
H4_DY_X = 0.011405263358128082
H4_DY_Y = -0.6124047558477557
H4_DY_Z = -0.7904621021799656
H4_DZ_X = 0.9913072378791483
H4_DZ_Y = -0.09669613806814681
H4_DZ_Z = 0.08921780658096168
#############  END of Description of junction: j1