#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 75:91:95:101:164:164
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  924
S1_NAME_ID3 = 927
S1_NUM_ID5_ORIG =  924
S1_NUM_ID3_ORIG = 927
S1_NAME2_ID5 =  925
S1_NAME2_ID3 = 926
S1_NUM2_ID5_ORIG =  925
S1_NUM2_ID3_ORIG = 926
S1_SQ2 = CA
S1_SQLEN2 = 2
S1_SQ = GCAC
S1_SQLEN = 4
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  906
S2_NAME_ID3 = 911
S2_NUM_ID5_ORIG =  906
S2_NUM_ID3_ORIG = 911
S2_NAME2_ID5 =  907
S2_NAME2_ID3 = 910
S2_NUM2_ID5_ORIG =  907
S2_NUM2_ID3_ORIG = 910
S2_SQ2 = AUCG
S2_SQLEN2 = 4
S2_SQ = UAUCGC
S2_SQLEN = 6
S2_CHAR = B
## Properties of strand 3
S3_NAME_ID5 =  943
S3_NAME_ID3 = 950
S3_NUM_ID5_ORIG =  943
S3_NUM_ID3_ORIG = 950
S3_NAME2_ID5 =  944
S3_NAME2_ID3 = 949
S3_NUM2_ID5_ORIG =  944
S3_NUM2_ID3_ORIG = 949
S3_SQ2 = CAUUCC
S3_SQLEN2 = 6
S3_SQ = GCAUUCCG
S3_SQLEN = 8
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  964
S4_NAME_ID3 = 967
S4_NUM_ID5_ORIG =  964
S4_NUM_ID3_ORIG = 967
S4_NAME2_ID5 =  965
S4_NAME2_ID3 = 966
S4_NUM2_ID5_ORIG =  965
S4_NUM2_ID3_ORIG = 966
S4_SQ2 = GU
S4_SQLEN2 = 2
S4_SQ = CGUA
S4_SQLEN = 4
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 925
H1_OUTID2_ORIG = 910
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 18.67411527541264
H1_P_Y = 20.070401304357258
H1_P_Z = 29.879274725778345
# Orientation:
H1_DX_X = 0.97804299631186
H1_DX_Y = -0.10925112358202327
H1_DX_Z = 0.17747137617480746
H1_DY_X = 0.17037125198458725
H1_DY_Y = -0.07128625589039927
H1_DY_Z = -0.9827979986845392
H1_DZ_X = 0.12002305554567272
H1_DZ_Y = 0.9914547199530581
H1_DZ_Z = -0.051107772601504564
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 944
H2_OUTID2_ORIG = 926
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 15.69296435755419
H2_P_Y = 6.757823272768089
H2_P_Z = 25.596840211976758
# Orientation:
H2_DX_X = 0.690352124812355
H2_DX_Y = 0.06622483237373356
H2_DX_Z = 0.7204361285666714
H2_DY_X = -0.7088526868569591
H2_DY_Y = -0.1372694123316407
H2_DY_Z = 0.6918706358661275
H2_DZ_X = 0.14471286087537294
H2_DZ_Y = -0.9883174490087665
H2_DZ_Z = -0.04782058011011969
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 2
H3_OUTID2 = 7
H3_INID2_ORIG = 965
H3_OUTID2_ORIG = 949
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 20.196620281012997
H3_P_Y = 38.86023356391255
H3_P_Z = 37.3832549700641
# Orientation:
H3_DX_X = 0.14126849144175324
H3_DX_Y = -0.7188189629717812
H3_DX_Z = 0.6806926705922081
H3_DY_X = 0.05276457979085336
H3_DY_Y = 0.6920780946889025
H3_DY_Z = 0.7198915265311001
H3_DZ_X = -0.9885641670854071
H3_DZ_Y = -0.0657815272242388
H3_DZ_Z = 0.13569700892348635
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 907
H4_OUTID2_ORIG = 966
H4_INSEQ_CHAR = B
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 34.29777219601434
H4_P_Y = 39.14020521213124
H4_P_Z = 36.6102970554836
# Orientation:
H4_DX_X = -0.1469068117353629
H4_DX_Y = -0.7758833071129487
H4_DX_Z = 0.6135336033252159
H4_DY_X = -0.018748799793080195
H4_DY_Y = -0.6179676455084504
H4_DY_Z = -0.7859799435170487
H4_DZ_X = 0.9889726341876539
H4_DZ_Y = -0.12696882628510053
H4_DZ_Z = 0.07623677576939514
#############  END of Description of junction: j1