#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:74:77:78:85:139
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 46.03363786512
H1_P_Y = 127.36966605701565
H1_P_Z = 37.26651585585163
# Orientation:
H1_DX_X = -0.17947668194497624
H1_DX_Y = -0.9398961534387382
H1_DX_Z = 0.29048810886004617
H1_DY_X = -0.5794861223310832
H1_DY_Y = -0.13761003418791518
H1_DY_Z = -0.8032803449086074
H1_DZ_X = 0.7949741849039498
H1_DZ_Y = -0.3125039187624168
H1_DZ_Z = -0.5199589850117405
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 64.05754344902735
H2_P_Y = 144.22238058502464
H2_P_Z = 56.16528260409792
# Orientation:
H2_DX_X = -0.6531434030732015
H2_DX_Y = 0.421830824533572
H2_DX_Z = 0.6288580527394814
H2_DY_X = 0.22373196481893842
H2_DY_Y = -0.68588958562313
H2_DY_Z = 0.6924590126873866
H2_DZ_X = 0.7234277454868732
H2_DZ_Y = 0.5929706837669642
H2_DZ_Z = 0.35360721889225744
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.75080229404297
H3_P_Y = 171.60974452319817
H3_P_Z = 66.29106330351058
# Orientation:
H3_DX_X = -0.7168877096055226
H3_DX_Y = 0.6841887801697908
H3_DX_Z = -0.13400643606306062
H3_DY_X = -0.33745215740421486
H3_DY_Y = -0.17232228820353157
H3_DY_Z = 0.9254356111861739
H3_DZ_X = 0.6100803662467769
H3_DZ_Y = 0.7086541766461778
H3_DZ_Z = 0.35441671044425505
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 28.149956542305056
H4_P_Y = 141.62081890986295
H4_P_Z = 69.45680623238347
# Orientation:
H4_DX_X = -0.7701734858811058
H4_DX_Y = -0.6255682269683973
H4_DX_Z = -0.12448773053350237
H4_DY_X = 0.5800265238383311
H4_DY_Y = -0.7680926863079094
H4_DY_Z = 0.27129846458153395
H4_DZ_X = -0.26533381482535745
H4_DZ_Y = 0.13674069857907512
H4_DZ_Z = 0.9544107858057345
#############  END of Description of junction: j1