############# Start of Description of junction: j52 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS1HS2HS2 FINGERPRINT = 14:19:148:155:167:170 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1828 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1828 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1829 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1829 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = ACUG S2_SQLEN2 = 4 S2_SQ = GACUGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2020 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2020 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2019 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2019 S4_SQ2 = UAA S4_SQLEN2 = 3 S4_SQ = UUAAC S4_SQLEN = 5 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 97.25727111028048 H1_P_Y = 140.60967562462534 H1_P_Z = 91.96232766430903 # Orientation: H1_DX_X = -0.020330905517525366 H1_DX_Y = 0.2294453734937747 H1_DX_Z = -0.9731091793129565 H1_DY_X = -0.39222128131575573 H1_DY_Y = -0.8971166181544561 H1_DY_Z = -0.20333283038932848 H1_DZ_X = -0.9196461932525324 H1_DZ_Y = 0.3775401886069858 H1_DZ_Z = 0.10823255158561551 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 111.22468214208402 H2_P_Y = 131.2576664462909 H2_P_Z = 78.39763161703578 # Orientation: H2_DX_X = 0.6554027607967043 H2_DX_Y = 0.5755275096711614 H2_DX_Z = 0.4890964186658522 H2_DY_X = 0.20544283127273388 H2_DY_Y = -0.759000169964736 H2_DY_Z = 0.6178284430747425 H2_DZ_X = 0.7268015301433479 H2_DZ_Y = -0.3044451142738467 H2_DZ_Z = -0.6156888079022451 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.65931604209834 H3_P_Y = 130.36784572618006 H3_P_Z = 93.82041293940414 # Orientation: H3_DX_X = 0.49802155742398213 H3_DX_Y = 0.8534385524123422 H3_DX_Z = -0.15367877406241348 H3_DY_X = 0.4839126718475484 H3_DY_Y = -0.12645747018029851 H3_DY_Z = 0.8659313103595281 H3_DZ_X = 0.7195853350134058 H3_DZ_Y = -0.5056195659702496 H3_DZ_Z = -0.4759682764026536 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 1829 H4_OUTID2_ORIG = 2019 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 106.12781916620318 H4_P_Y = 139.9642791678394 H4_P_Z = 103.58818421750077 # Orientation: H4_DX_X = 0.06946036824965063 H4_DX_Y = 0.8050964774713236 H4_DX_Z = -0.5890627464081319 H4_DY_X = -0.5664044378140858 H4_DY_Y = -0.45425241049548504 H4_DY_Z = -0.6876341762765605 H4_DZ_X = -0.8211950255981435 H4_DZ_Y = 0.3814110768217347 H4_DZ_Z = 0.42445767799692646 ############# END of Description of junction: j52