############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:40:41:41:62:64:64:76:92:101:102:104:118:124:130:131:134:142:142:158:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 58.2979502471828 H1_P_Y = 92.29349313378385 H1_P_Z = 81.03989849748666 # Orientation: H1_DX_X = 0.16069223195122362 H1_DX_Y = -0.9841649820663463 H1_DX_Z = 0.07481506977124752 H1_DY_X = 0.23317927196841737 H1_DY_Y = -0.0358001795199101 H1_DY_Z = -0.9717745490959402 H1_DZ_X = 0.959064874612146 H1_DZ_Y = 0.17360194474915147 H1_DZ_Z = 0.22373406326373413 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 41.3437786348427 H2_P_Y = 84.2763521099764 H2_P_Z = 71.02361571011372 # Orientation: H2_DX_X = -0.40301957666687116 H2_DX_Y = 0.41983074372944884 H2_DX_Z = 0.8132142198970911 H2_DY_X = -0.3698930855538336 H2_DY_Y = 0.7380404735293524 H2_DY_Z = -0.5643362160025163 H2_DZ_X = -0.8371107012114507 H2_DZ_Y = -0.528240859885102 H2_DZ_Z = -0.1421522699963731 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.71842859049774 H3_P_Y = 90.1106581746023 H3_P_Z = 98.36188773344239 # Orientation: H3_DX_X = -0.20056069341661242 H3_DX_Y = 0.9209501576337402 H3_DX_Z = 0.3341050963553869 H3_DY_X = -0.7479911412850768 H3_DY_Y = -0.36418993556280554 H3_DY_Z = 0.5548647974000716 H3_DZ_X = 0.6326805361438801 H3_DZ_Y = -0.13862358381300055 H3_DZ_Z = 0.7619047454869587 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.28909686709188 H4_P_Y = 102.61700968414878 H4_P_Z = 104.023096921019 # Orientation: H4_DX_X = -0.9841420867110671 H4_DX_Y = 0.16051522088683612 H4_DX_Z = 0.07549315881357188 H4_DY_X = -0.03973990073490796 H4_DY_Y = -0.6142963281269687 H4_DY_Z = 0.7880740837886435 H4_DZ_X = 0.17287305589240276 H4_DZ_Y = 0.7725767826652543 H4_DZ_Z = 0.6109337291662911 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.637692561703332 H5_P_Y = 97.72828921193481 H5_P_Z = 94.18132606802077 # Orientation: H5_DX_X = -0.139510604570372 H5_DX_Y = 0.9307864196400857 H5_DX_Z = -0.3378955936765067 H5_DY_X = -0.9740637364475209 H5_DY_Y = -0.06760713840017729 H5_DY_Z = 0.2159377506950193 H5_DZ_X = 0.17814777166805662 H5_DZ_Y = 0.3592574506547237 H5_DZ_Z = 0.9160772105007169 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.364546719669736 H6_P_Y = 90.59086161417234 H6_P_Z = 72.9935570901732 # Orientation: H6_DX_X = 0.6967767445127429 H6_DX_Y = -0.6753889538173752 H6_DX_Z = 0.24156144015074688 H6_DY_X = -0.7148285531061607 H6_DY_Y = -0.681690825051831 H6_DY_Z = 0.15594152334868738 H6_DZ_X = 0.05934903512591916 H6_DZ_Y = -0.2813314417224433 H6_DZ_Z = -0.9577736224849787 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 31.401127180779728 H7_P_Y = 100.30455762083625 H7_P_Z = 77.87171726688884 # Orientation: H7_DX_X = 0.9596441186727738 H7_DX_Y = -0.2254654313634461 H7_DX_Z = -0.1680729150007636 H7_DY_X = -0.27427015719228365 H7_DY_Y = -0.8824101717474804 H7_DY_Z = -0.3822671443771952 H7_DZ_X = -0.06212122318884283 H7_DZ_Y = 0.41293780168044236 H7_DZ_Z = -0.9086381708759745 ############# END of Description of junction: j13