#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 8:75:78:79:86:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 3
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 3
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 3
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 3
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 3
H1_OUTSEQ_CHAR = 3
# Position:
H1_P_X = 63.23062062953339
H1_P_Y = -51.213404017301976
H1_P_Z = 14.464429276098429
# Orientation:
H1_DX_X = -0.6234303471458489
H1_DX_Y = -0.5850673731939224
H1_DX_Z = -0.5186817628195293
H1_DY_X = 0.5912256052624656
H1_DY_Y = -0.7868570103296619
H1_DY_Z = 0.1769415976447828
H1_DZ_X = -0.5116511369474637
H1_DZ_Y = -0.1963471775173531
H1_DZ_Z = 0.8364573509398667
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 3
H2_OUTSEQ_CHAR = 3
# Position:
H2_P_X = 55.78604297751763
H2_P_Y = -21.29560616932631
H2_P_Z = 15.412288198891215
# Orientation:
H2_DX_X = 0.44158482983670666
H2_DX_Y = 0.37781097893906335
H2_DX_Z = -0.8137946314956803
H2_DY_X = -0.8783666687302727
H2_DY_Y = -0.0029193529904674165
H2_DY_Z = -0.47797852738569446
H2_DZ_X = -0.18296128913452492
H2_DZ_Y = 0.9258781461786576
H2_DZ_Z = 0.33056742898689784
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 3
H3_OUTSEQ_CHAR = 3
# Position:
H3_P_X = 91.33290528944649
H3_P_Y = -9.8938976531574
H3_P_Z = -11.565817734602081
# Orientation:
H3_DX_X = 0.9098329678697468
H3_DX_Y = 0.16586657016375383
H3_DX_Z = -0.3803843470484001
H3_DY_X = -0.41002565878646635
H3_DY_Y = 0.21818082826359486
H3_DY_Z = -0.8855936344141959
H3_DZ_X = -0.06389780680160584
H3_DZ_Y = 0.9617096272162033
H3_DZ_Z = 0.26651766021338297
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 3
H4_OUTSEQ_CHAR = 3
# Position:
H4_P_X = 71.60188155358392
H4_P_Y = -30.300423832107565
H4_P_Z = -18.17529571477683
# Orientation:
H4_DX_X = 0.07796722992387117
H4_DX_Y = -0.8548481612780741
H4_DX_Z = -0.5129870682751161
H4_DY_X = -0.9881882950441394
H4_DY_Y = -0.13435700497945646
H4_DY_Z = 0.07370270517900579
H4_DZ_X = -0.1319280280901296
H4_DZ_Y = 0.501181420617776
H4_DZ_Z = -0.8552263905141118
#############  END of Description of junction: j1