#############  Start of Description of junction: j40
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS7HS8HS8HS9HS11
FINGERPRINT = 19:26:30:47:108:126:131:150:155:172
LOOP_LENGTH_SUM = 43
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2479
S1_NAME_ID3 = 2492
S1_NUM_ID5_ORIG =  2479
S1_NUM_ID3_ORIG = 2492
S1_NAME2_ID5 =  2481
S1_NAME2_ID3 = 2490
S1_NUM2_ID5_ORIG =  2481
S1_NUM2_ID3_ORIG = 2490
S1_SQ2 = GGAUAACAGA
S1_SQLEN2 = 10
S1_SQ = AGGGAUAACAGAGU
S1_SQLEN = 14
S1_CHAR = 3
## Properties of strand 2
S2_NAME_ID5 =  2093
S2_NAME_ID3 = 2107
S2_NUM_ID5_ORIG =  2093
S2_NUM_ID3_ORIG = 2107
S2_NAME2_ID5 =  2095
S2_NAME2_ID3 = 2105
S2_NUM2_ID5_ORIG =  2095
S2_NUM2_ID3_ORIG = 2105
S2_SQ2 = AAGCGAAGACC
S2_SQLEN2 = 11
S2_SQ = GGAAGCGAAGACCCU
S2_SQLEN = 15
S2_CHAR = 3
## Properties of strand 3
S3_NAME_ID5 =  2529
S3_NAME_ID3 = 2545
S3_NUM_ID5_ORIG =  2529
S3_NUM_ID3_ORIG = 2545
S3_NAME2_ID5 =  2531
S3_NAME2_ID3 = 2543
S3_NUM2_ID5_ORIG =  2531
S3_NUM2_ID3_ORIG = 2543
S3_SQ2 = UACCUCGAUGUCG
S3_SQLEN2 = 13
S3_SQ = GCUACCUCGAUGUCGGU
S3_SQLEN = 17
S3_CHAR = 3
## Properties of strand 4
S4_NAME_ID5 =  2613
S4_NAME_ID3 = 2625
S4_NUM_ID5_ORIG =  2613
S4_NUM_ID3_ORIG = 2625
S4_NAME2_ID5 =  2615
S4_NAME2_ID3 = 2623
S4_NUM2_ID5_ORIG =  2615
S4_NUM2_ID3_ORIG = 2623
S4_SQ2 = UGGGUUUAG
S4_SQLEN2 = 9
S4_SQ = GCUGGGUUUAGAC
S4_SQLEN = 13
S4_CHAR = 3
## Properties of strand 5
S5_NAME_ID5 =  2639
S5_NAME_ID3 = 2652
S5_NUM_ID5_ORIG =  2639
S5_NUM_ID3_ORIG = 2652
S5_NAME2_ID5 =  2641
S5_NAME2_ID3 = 2650
S5_NUM2_ID5_ORIG =  2641
S5_NUM2_ID3_ORIG = 2650
S5_SQ2 = CGGCUGCUAU
S5_SQLEN2 = 10
S5_SQ = GUCGGCUGCUAUCU
S5_SQLEN = 14
S5_CHAR = 3
## Properties of helix 1
H1_INID = 1
H1_OUTID = 15
H1_INID2 = 3
H1_OUTID2 = 13
H1_INID2_ORIG = 2481
H1_OUTID2_ORIG = 2105
H1_INSEQ_CHAR = 3
H1_OUTSEQ_CHAR = 3
# Position:
H1_P_X = 19.455329123688482
H1_P_Y = -25.098543492683504
H1_P_Z = -4.715258708708745
# Orientation:
H1_DX_X = -0.44004842584412174
H1_DX_Y = -0.6690282879444993
H1_DX_Z = -0.5989645505722025
H1_DY_X = 0.7734824235914353
H1_DY_Y = -0.6212392928660542
H1_DY_Z = 0.12564506116201102
H1_DZ_X = -0.4561604140072113
H1_DZ_Y = -0.4079986408425107
H1_DZ_Z = 0.7908569945087631
## Properties of helix 2
H2_INID = 1
H2_OUTID = 14
H2_INID2 = 3
H2_OUTID2 = 12
H2_INID2_ORIG = 2531
H2_OUTID2_ORIG = 2490
H2_INSEQ_CHAR = 3
H2_OUTSEQ_CHAR = 3
# Position:
H2_P_X = 10.599929640221488
H2_P_Y = -13.090008085274615
H2_P_Z = -36.26871190873824
# Orientation:
H2_DX_X = -0.04619545873842945
H2_DX_Y = -0.8904151070566844
H2_DX_Z = -0.4527989804727639
H2_DY_X = -0.8873711163501454
H2_DY_Y = -0.1715808782758259
H2_DY_Z = 0.42793983698365423
H2_DZ_X = -0.4587357425135341
H2_DZ_Y = 0.4215696138662359
H2_DZ_Z = -0.7822023901812329
## Properties of helix 3
H3_INID = 1
H3_OUTID = 17
H3_INID2 = 3
H3_OUTID2 = 15
H3_INID2_ORIG = 2615
H3_OUTID2_ORIG = 2543
H3_INSEQ_CHAR = 3
H3_OUTSEQ_CHAR = 3
# Position:
H3_P_X = 23.14469695365394
H3_P_Y = 1.5970633945930768
H3_P_Z = -28.433465994919825
# Orientation:
H3_DX_X = -0.24823620582384365
H3_DX_Y = 0.9352935467763315
H3_DX_Z = 0.25219985621869156
H3_DY_X = 0.9686504809409229
H3_DY_Y = 0.24228354576477273
H3_DY_Z = 0.05490837117024583
H3_DZ_X = -0.00974843018649807
H3_DZ_Y = 0.2579237577467368
H3_DZ_Z = -0.966116092040032
## Properties of helix 4
H4_INID = 1
H4_OUTID = 13
H4_INID2 = 3
H4_OUTID2 = 11
H4_INID2_ORIG = 2641
H4_OUTID2_ORIG = 2623
H4_INSEQ_CHAR = 3
H4_OUTSEQ_CHAR = 3
# Position:
H4_P_X = 6.60496493148184
H4_P_Y = -5.6622358539547335
H4_P_Z = 1.3063448408289453
# Orientation:
H4_DX_X = 0.08839919806214702
H4_DX_Y = 0.7540098024935862
H4_DX_Z = 0.6508877011632275
H4_DY_X = -0.7034349774791018
H4_DY_Y = 0.509903928785743
H4_DY_Z = -0.4951537295303753
H4_DZ_X = -0.7052409618286113
H4_DZ_Y = -0.414085982801212
H4_DZ_Z = 0.5754719668294968
## Properties of helix 5
H5_INID = 1
H5_OUTID = 14
H5_INID2 = 3
H5_OUTID2 = 12
H5_INID2_ORIG = 2095
H5_OUTID2_ORIG = 2650
H5_INSEQ_CHAR = 3
H5_OUTSEQ_CHAR = 3
# Position:
H5_P_X = 42.656051038277454
H5_P_Y = -1.354893349063489
H5_P_Z = -32.867218632582635
# Orientation:
H5_DX_X = 0.05548513065511429
H5_DX_Y = -0.8578200784465269
H5_DX_Z = -0.5109462919820231
H5_DY_X = -0.9390541434974793
H5_DY_Y = 0.12904648748223924
H5_DY_Z = -0.3186288117052669
H5_DZ_X = 0.33926201652469246
H5_DZ_Y = 0.49748539383834267
H5_DZ_Z = -0.7983793378220057
#############  END of Description of junction: j40