############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 141 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.674130088152424 H1_P_Y = 128.70637210024222 H1_P_Z = 14.158802308459023 # Orientation: H1_DX_X = 0.11418819667063218 H1_DX_Y = -0.7783838150425595 H1_DX_Z = 0.6173165251480892 H1_DY_X = 0.6109388532068465 H1_DY_Y = 0.5450134724792406 H1_DY_Z = 0.5742073079110259 H1_DZ_X = -0.7833994979468883 H1_DZ_Y = 0.3115749529341656 H1_DZ_Z = 0.5377790209004569 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 60.50091762841558 H2_P_Y = 119.78714302134416 H2_P_Z = 1.0224305057631247 # Orientation: H2_DX_X = -0.9429773285090093 H2_DX_Y = -0.3328013753105239 H2_DX_Z = -0.006082968802474831 H2_DY_X = -0.21091133039959686 H2_DY_Y = 0.611546005795816 H2_DY_Z = -0.762579762060506 H2_DZ_X = 0.25750760887223123 H2_DZ_Y = -0.7178124597599407 H2_DZ_Z = -0.6468655996312505 ############# END of Description of junction: j4