############# Start of Description of junction: j52 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 13:25:153:156:169:177 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 97.11886247169501 H1_P_Y = 139.68428642063537 H1_P_Z = 91.88696380980261 # Orientation: H1_DX_X = -0.06940826865691463 H1_DX_Y = 0.251502267277516 H1_DX_Z = -0.965364750649357 H1_DY_X = -0.4161087598594122 H1_DY_Y = -0.8867954193853791 H1_DY_Z = -0.20111535029772654 H1_DZ_X = -0.9066620054961589 H1_DZ_Y = 0.38773766094021767 H1_DZ_Z = 0.16620323125110303 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 110.73066489071643 H2_P_Y = 130.5240983006289 H2_P_Z = 78.2825633616592 # Orientation: H2_DX_X = 0.6505864370186032 H2_DX_Y = 0.5715698644306713 H2_DX_Z = 0.5000451760012652 H2_DY_X = 0.18715932409595837 H2_DY_Y = -0.7588096132888609 H2_DY_Z = 0.6238424145442139 H2_DZ_X = 0.7360086109356132 H2_DZ_Y = -0.3122752965815607 H2_DZ_Z = -0.6006458721855381 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.22215924132297 H3_P_Y = 129.6735691688458 H3_P_Z = 93.56718232541695 # Orientation: H3_DX_X = 0.5178975450100722 H3_DX_Y = 0.8430788196403114 H3_DX_Z = -0.1449145843124171 H3_DY_X = 0.5005062481146183 H3_DY_Y = -0.16125315545806984 H3_DY_Z = 0.8505826917196515 H3_DZ_X = 0.693740317749203 H3_DZ_Y = -0.5130453427609609 H3_DZ_Z = -0.5054788302199427 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 104.42251643043105 H4_P_Y = 139.7947205596068 H4_P_Z = 104.0217527179878 # Orientation: H4_DX_X = -0.3812664489901749 H4_DX_Y = 0.4793452173639423 H4_DX_Z = -0.7904834327579238 H4_DY_X = -0.5369444384839994 H4_DY_Y = -0.8108795143294856 H4_DY_Z = -0.23273393225279904 H4_DZ_X = -0.7525467193839432 H4_DZ_Y = 0.3357120430235625 H4_DZ_Z = 0.566542901564759 ############# END of Description of junction: j52