############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 31:40:41:43:62:65:65:76:91:101:101:104:118:123:131:131:135:141:144:157:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.84570719431495 H1_P_Y = 91.51249769833531 H1_P_Z = 80.67531604910552 # Orientation: H1_DX_X = 0.15087783951570088 H1_DX_Y = -0.9866904195689017 H1_DX_Z = 0.060645638540734126 H1_DY_X = 0.21970132813986254 H1_DY_Y = -0.0263448957899044 H1_DY_Z = -0.9752113990717106 H1_DZ_X = 0.9638294475459119 H1_DZ_Y = 0.1604617162963109 H1_DZ_Z = 0.2128023346831185 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 41.00724659618345 H2_P_Y = 83.48697831642693 H2_P_Z = 70.59889458980281 # Orientation: H2_DX_X = -0.42243621540351484 H2_DX_Y = 0.43418038844302487 H2_DX_Z = 0.7956349880485618 H2_DY_X = -0.35487066408420276 H2_DY_Y = 0.7285023449684473 H2_DY_Z = -0.5859617266920338 H2_DZ_X = -0.8340350446402098 H2_DZ_Y = -0.5298789707725007 H2_DZ_Z = -0.15366789074194287 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.334030576208846 H3_P_Y = 89.46744105710415 H3_P_Z = 97.92100849724923 # Orientation: H3_DX_X = -0.2113129377566807 H3_DX_Y = 0.9105991087253926 H3_DX_Z = 0.35518460766923 H3_DY_X = -0.7578274563628327 H3_DY_Y = -0.3821369942309474 H3_DY_Z = 0.5288372755610027 H3_DZ_X = 0.6172879301584402 H3_DZ_Y = -0.15741848947517667 H3_DZ_Z = 0.7708274972080744 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 32.784734027435256 H4_P_Y = 101.76063921360618 H4_P_Z = 103.8492251342765 # Orientation: H4_DX_X = -0.9827571766201935 H4_DX_Y = 0.16569700824510392 H4_DX_Z = 0.08205384366461033 H4_DY_X = -0.03841833814997386 H4_DY_Y = -0.6170747540956683 H4_DY_Z = 0.7859661437692864 H4_DZ_X = 0.1808655940064483 H4_DZ_Y = 0.7692614960573536 H4_DZ_Z = 0.6128004467918515 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.169380830304814 H5_P_Y = 96.9965580137229 H5_P_Z = 93.92418959590702 # Orientation: H5_DX_X = -0.14390901881845863 H5_DX_Y = 0.9363960416392985 H5_DX_Z = -0.3200822511557817 H5_DY_X = -0.9738875083890637 H5_DY_Y = -0.07661921424475793 H5_DY_Z = 0.21371152756054812 H5_DZ_X = 0.17559417788313247 H5_DZ_Y = 0.34247912229909616 H5_DZ_Z = 0.9229706038020851 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.182260474597985 H6_P_Y = 89.92255862499663 H6_P_Z = 72.75526335026933 # Orientation: H6_DX_X = 0.7037745072861181 H6_DX_Y = -0.6722104618959719 H6_DX_Z = 0.22985764684209187 H6_DY_X = -0.7077079442106893 H6_DY_Y = -0.6916360155071857 H6_DY_Z = 0.14418421465067865 H6_DZ_X = 0.06205568946728235 H6_DZ_Y = -0.26414525733194694 H6_DZ_Z = -0.9624844801002155 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.847235919881463 H7_P_Y = 99.65770752937433 H7_P_Z = 77.3854916448733 # Orientation: H7_DX_X = 0.9611953546785585 H7_DX_Y = -0.21131800447264482 H7_DX_Z = -0.17733637847338457 H7_DY_X = -0.2656973326908272 H7_DY_Y = -0.8820825160926944 H7_DY_Z = -0.3890184599791411 H7_DZ_X = -0.07421871425274773 H7_DZ_Y = 0.4210405393655918 H7_DZ_Z = -0.9040002470494102 ############# END of Description of junction: j13