############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS4 FINGERPRINT = 139 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 213 S1_NAME_ID3 = 222 S1_NUM_ID5_ORIG = 213 S1_NUM_ID3_ORIG = 222 S1_NAME2_ID5 = 215 S1_NAME2_ID3 = 220 S1_NUM2_ID5_ORIG = 215 S1_NUM2_ID3_ORIG = 220 S1_SQ2 = GUUAGU S1_SQLEN2 = 6 S1_SQ = CCGUUAGUAG S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 230 S2_NAME_ID3 = 238 S2_NUM_ID5_ORIG = 230 S2_NUM_ID3_ORIG = 238 S2_NAME2_ID5 = 232 S2_NAME2_ID3 = 236 S2_NUM2_ID5_ORIG = 232 S2_NUM2_ID3_ORIG = 236 S2_SQ2 = AACCC S2_SQLEN2 = 5 S2_SQ = CGAACCCGG S2_SQLEN = 9 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 215 H1_OUTID2_ORIG = 236 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 8.079422791934284 H1_P_Y = 170.27894663631264 H1_P_Z = 72.80781344062171 # Orientation: H1_DX_X = -0.6336436786944706 H1_DX_Y = -0.7197869697161821 H1_DX_Z = -0.2835531813916674 H1_DY_X = -0.056642161232986155 H1_DY_Y = -0.32237699974760403 H1_DY_Z = 0.9449152002188299 H1_DZ_X = -0.7715486724902085 H1_DZ_Y = 0.6148006085394968 H1_DZ_Z = 0.16350185845448095 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 232 H2_OUTID2_ORIG = 220 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 34.10081874432375 H2_P_Y = 154.27669139736938 H2_P_Z = 70.85601968224314 # Orientation: H2_DX_X = -0.08319475165362888 H2_DX_Y = 0.9707655565188134 H2_DX_Z = -0.22515076631898978 H2_DY_X = 0.1437674236958557 H2_DY_Y = 0.2352624055721435 H2_DY_Z = 0.9612400992510999 H2_DZ_X = 0.986108290798299 H2_DZ_Y = 0.04760078571987947 H2_DZ_Z = -0.15913706047840037 ############# END of Description of junction: j2