#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 177
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 12
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 12
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 10
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 10
S1_SQ2 = GAAG
S1_SQLEN2 = 4
S1_SQ = GUGAAGUC
S1_SQLEN = 8
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 20
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 20
S2_NAME2_ID5 =  16
S2_NAME2_ID3 = 18
S2_NUM2_ID5_ORIG =  16
S2_NUM2_ID3_ORIG = 18
S2_SQ2 = CAC
S2_SQLEN2 = 3
S2_SQ = GUCACAC
S2_SQLEN = 7
S2_CHAR = C
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 18
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = C
# Position:
H1_P_X = -8.527121797601746
H1_P_Y = -1.7109349873607531
H1_P_Z = 15.372357292233959
# Orientation:
H1_DX_X = 0.9880122226027872
H1_DX_Y = 0.1543559937299923
H1_DX_Z = 0.0024647894691867123
H1_DY_X = 0.154374309611784
H1_DY_Y = -0.9879446352748911
H1_DY_Z = -0.011574548088326253
H1_DZ_X = 6.484746610180281E-4
H1_DZ_Y = 0.011816295155014478
H1_DZ_Z = -0.999929974872952
## Properties of helix 2
H2_INID = 1
H2_OUTID = 8
H2_INID2 = 3
H2_OUTID2 = 6
H2_INID2_ORIG = 16
H2_OUTID2_ORIG = 10
H2_INSEQ_CHAR = C
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -8.987400647238536
H2_P_Y = -0.8576225532858577
H2_P_Z = 35.640846183937846
# Orientation:
H2_DX_X = -0.4701486714188938
H2_DX_Y = 0.8819121244651291
H2_DX_Z = -0.03451422148118155
H2_DY_X = -0.8821159642275038
H2_DY_Y = -0.4708159667612357
H2_DY_Z = -0.014274140873105523
H2_DZ_X = -0.028838384455983856
H2_DZ_Y = 0.023734577394303513
H2_DZ_Z = 0.99930226529208
#############  END of Description of junction: j1