############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS3 FINGERPRINT = 61 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 8 S1_NAME_ID3 = 16 S1_NUM_ID5_ORIG = 8 S1_NUM_ID3_ORIG = 16 S1_NAME2_ID5 = 10 S1_NAME2_ID3 = 14 S1_NUM2_ID5_ORIG = 10 S1_NUM2_ID3_ORIG = 14 S1_SQ2 = CAGAG S1_SQLEN2 = 5 S1_SQ = UCCAGAGGU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 23 S2_NAME_ID3 = 28 S2_NUM_ID5_ORIG = 23 S2_NUM_ID3_ORIG = 28 S2_NAME2_ID5 = 25 S2_NAME2_ID3 = 26 S2_NUM2_ID5_ORIG = 25 S2_NUM2_ID3_ORIG = 26 S2_SQ2 = CG S2_SQLEN2 = 2 S2_SQ = ACCGGA S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 10 H1_OUTID2_ORIG = 26 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 0.48726084628183575 H1_P_Y = 0.9329709396332699 H1_P_Z = -1.435556580751851 # Orientation: H1_DX_X = -0.360905507653837 H1_DX_Y = -0.6572684625480527 H1_DX_Z = -0.6616232936383408 H1_DY_X = 0.11395472354374125 H1_DY_Y = 0.6730420746494465 H1_DY_Z = -0.7307726641943031 H1_DZ_X = 0.9256141396538817 H1_DZ_Y = -0.3391349788672483 H1_DZ_Z = -0.1680057456800672 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 25 H2_OUTID2_ORIG = 14 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = -11.950456257734244 H2_P_Y = -17.728819793266158 H2_P_Z = 4.545143145864056 # Orientation: H2_DX_X = 0.8879226889212468 H2_DX_Y = 0.23122321614847507 H2_DX_Z = -0.3976545269613059 H2_DY_X = 0.4443825107996382 H2_DY_Y = -0.20788613214440588 H2_DY_Z = 0.8713825452448827 H2_DZ_X = 0.11881701306746528 H2_DZ_Y = -0.9504310497747817 H2_DZ_Z = -0.2873383667903271 ############# END of Description of junction: j2