#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS12HS2
FINGERPRINT = 11:20:156:161:172:177
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  93
S1_NAME_ID3 = 97
S1_NUM_ID5_ORIG =  93
S1_NUM_ID3_ORIG = 97
S1_NAME2_ID5 =  94
S1_NAME2_ID3 = 96
S1_NUM2_ID5_ORIG =  94
S1_NUM2_ID3_ORIG = 96
S1_SQ2 = GGC
S1_SQLEN2 = 3
S1_SQ = GGGCG
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  78
S2_NAME_ID3 = 81
S2_NUM_ID5_ORIG =  78
S2_NUM_ID3_ORIG = 81
S2_NAME2_ID5 =  79
S2_NAME2_ID3 = 80
S2_NUM2_ID5_ORIG =  79
S2_NUM2_ID3_ORIG = 80
S2_SQ2 = GC
S2_SQLEN2 = 2
S2_SQ = UGCC
S2_SQLEN = 4
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  106
S3_NAME_ID3 = 111
S3_NUM_ID5_ORIG =  106
S3_NUM_ID3_ORIG = 111
S3_NAME2_ID5 =  107
S3_NAME2_ID3 = 110
S3_NUM2_ID5_ORIG =  107
S3_NUM2_ID3_ORIG = 110
S3_SQ2 = GACG
S3_SQLEN2 = 4
S3_SQ = CGACGG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  229
S4_NAME_ID3 = 232
S4_NUM_ID5_ORIG =  229
S4_NUM_ID3_ORIG = 232
S4_NAME2_ID5 =  230
S4_NAME2_ID3 = 231
S4_NUM2_ID5_ORIG =  230
S4_NUM2_ID3_ORIG = 231
S4_SQ2 = CC
S4_SQLEN2 = 2
S4_SQ = CCCA
S4_SQLEN = 4
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 4
H1_INID2 = 2
H1_OUTID2 = 3
H1_INID2_ORIG = 94
H1_OUTID2_ORIG = 80
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 10.630877621241849
H1_P_Y = 9.768394632848977
H1_P_Z = 105.04929055258032
# Orientation:
H1_DX_X = 0.46618146824454776
H1_DX_Y = 0.42572432259397
H1_DX_Z = 0.775521527629806
H1_DY_X = 0.13855789343123348
H1_DY_Y = 0.8306510894195522
H1_DY_Z = -0.5392777371763202
H1_DZ_X = -0.8737714511434085
H1_DZ_Y = 0.3588559164874088
H1_DZ_Z = 0.3282466791434757
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 107
H2_OUTID2_ORIG = 96
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 25.356327678836667
H2_P_Y = 7.120867044252941
H2_P_Z = 99.48797443322763
# Orientation:
H2_DX_X = 0.2097302079352481
H2_DX_Y = -0.26919095883029165
H2_DX_Z = 0.9399731206600848
H2_DY_X = -0.11820006903198532
H2_DY_Y = -0.9612841275266772
H2_DY_Z = -0.2489208103917946
H2_DZ_X = 0.9705884728144412
H2_DZ_Y = -0.05889867442735408
H2_DZ_Z = -0.23342870986755315
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 230
H3_OUTID2_ORIG = 110
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 16.302741998300437
H3_P_Y = -6.12730502894124
H3_P_Z = 117.96959632213284
# Orientation:
H3_DX_X = 0.4862755659763174
H3_DX_Y = 0.7944656083109916
H3_DX_Z = 0.3638137863598132
H3_DY_X = 0.1662814569809079
H3_DY_Y = -0.49288147313090924
H3_DY_Z = 0.8540599103743318
H3_DZ_X = 0.8578383011959296
H3_DZ_Y = -0.35481297982930915
H3_DZ_Z = -0.3717811161771465
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 79
H4_OUTID2_ORIG = 231
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 6.864475958490846
H4_P_Y = -2.1746127013735745
H4_P_Z = 123.36764748594672
# Orientation:
H4_DX_X = 0.4412982611795293
H4_DX_Y = 0.8857191113573346
H4_DX_Z = 0.14407463502050177
H4_DY_X = -0.4003894543006812
H4_DY_Y = 0.3380326906619242
H4_DY_Z = -0.8517171977415217
H4_DZ_X = -0.8030841360434948
H4_DZ_Y = 0.3181753538856009
H4_DZ_Z = 0.5038058302709914
#############  END of Description of junction: j1