############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 61:128:170 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.26505760888275 H1_P_Y = 155.88381806507635 H1_P_Z = 42.4554735082619 # Orientation: H1_DX_X = 0.16502030012500768 H1_DX_Y = 0.8482183362991691 H1_DX_Z = -0.5032831752726281 H1_DY_X = -0.7161540876848349 H1_DY_Y = -0.24780889013331375 H1_DY_Z = -0.6524676824664937 H1_DZ_X = -0.6781530971977858 H1_DZ_Y = 0.46809871601698205 H1_DZ_Z = 0.5665615313664532 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 47.08396502892715 H2_P_Y = 153.25155428961187 H2_P_Z = 20.945324144770723 # Orientation: H2_DX_X = 0.438049244899851 H2_DX_Y = 0.7782977316130655 H2_DX_Z = -0.44985053074170267 H2_DY_X = 0.20381587907071008 H2_DY_Y = -0.5733729620171744 H2_DY_Z = -0.7935379851439315 H2_DZ_X = -0.8755409450627099 H2_DZ_Y = 0.2559220338181092 H2_DZ_Z = -0.40979502940507473 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 67.59035997747286 H3_P_Y = 148.84489921952184 H3_P_Z = 31.670661335333055 # Orientation: H3_DX_X = 0.6083962265147846 H3_DX_Y = 0.4319957246334525 H3_DX_Z = 0.6657580081838894 H3_DY_X = -0.09927599376882768 H3_DY_Y = -0.7908586269383306 H3_DY_Z = 0.6038931273482397 H3_DZ_X = 0.7873997133754784 H3_DZ_Y = -0.43350008776889126 H3_DZ_Z = -0.43826859946906893 ############# END of Description of junction: j1