#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:75:78:78:86:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.16804418343105
H1_P_Y = 127.10076691984654
H1_P_Z = 36.83047371543552
# Orientation:
H1_DX_X = -0.19565713474990076
H1_DX_Y = -0.9313985467846067
H1_DX_Z = 0.3069446736286068
H1_DY_X = -0.5779572868543212
H1_DY_Y = -0.14334507014513065
H1_DY_Z = -0.8033788430355173
H1_DZ_X = 0.7922648926927494
H1_DZ_Y = -0.3345877133317856
H1_DZ_Z = -0.5102620913745639
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 62.936269276784
H2_P_Y = 143.88647652022328
H2_P_Z = 55.775698583760075
# Orientation:
H2_DX_X = -0.6481886432985533
H2_DX_Y = 0.42431467882292395
H2_DX_Z = 0.6323041483607312
H2_DY_X = 0.23509328377761562
H2_DY_Y = -0.6782885613778546
H2_DY_Z = 0.6961722311516212
H2_DZ_X = 0.7242807678113792
H2_DZ_Y = 0.599901392596621
H2_DZ_Z = 0.3399054111649136
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.021169395206925
H3_P_Y = 171.0480613732018
H3_P_Z = 65.9858645317709
# Orientation:
H3_DX_X = -0.709100786292236
H3_DX_Y = 0.6907192142878102
H3_DX_Z = -0.14171464953675184
H3_DY_X = -0.34157894823984236
H3_DY_Y = -0.16067864105562535
H3_DY_Z = 0.9260163046231185
H3_DZ_X = 0.6168467370417723
H3_DZ_Y = 0.705045630666632
H3_DZ_Z = 0.3498724934583919
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.205151452838617
H4_P_Y = 141.57353892100247
H4_P_Z = 68.8553451668943
# Orientation:
H4_DX_X = -0.7555201976651844
H4_DX_Y = -0.6440513732333386
H4_DX_Z = -0.11994606936539753
H4_DY_X = 0.6043273574747161
H4_DY_Y = -0.7558458224708602
H4_DY_Z = 0.2519633657121858
H4_DZ_X = -0.2529380871430611
H4_DZ_Y = 0.11787672072819078
H4_DZ_Z = 0.9602746496616419
#############  END of Description of junction: j1