############# Start of Description of junction: j11 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 31:39:41:43:61:65:66:75:91:100:101:104:119:125:132:132:135:141:142:157:166 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.60474245874079 H1_P_Y = 91.46238323074732 H1_P_Z = 80.46584341244906 # Orientation: H1_DX_X = 0.1450387297946989 H1_DX_Y = -0.9875090623808234 H1_DX_Z = 0.06155987796675788 H1_DY_X = 0.21312093382599784 H1_DY_Y = -0.029576676470014718 H1_DY_Z = -0.976578050016542 H1_DZ_X = 0.9662004111076925 H1_DZ_Y = 0.15476133859827712 H1_DZ_Z = 0.20616908994946925 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.68777113062894 H2_P_Y = 83.69787174793028 H2_P_Z = 70.54350043270378 # Orientation: H2_DX_X = -0.4344894400218422 H2_DX_Y = 0.43033493579363835 H2_DX_Z = 0.7912210623744613 H2_DY_X = -0.34421128744959617 H2_DY_Y = 0.7324543204413061 H2_DY_Z = -0.5873919118094619 H2_DZ_X = -0.8323085462145627 H2_DZ_Y = -0.5275628033726036 H2_DZ_Z = -0.17011752524605583 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 46.95586403676633 H3_P_Y = 89.62138494633645 H3_P_Z = 97.66201090098916 # Orientation: H3_DX_X = -0.21331474098948178 H3_DX_Y = 0.9170915622433995 H3_DX_Z = 0.33680838430561266 H3_DY_X = -0.7550787436143409 H3_DY_Y = -0.3735201752927395 H3_DY_Z = 0.5388309285769282 H3_DZ_X = 0.6199620248195714 H3_DZ_Y = -0.13937627169374878 H3_DZ_Z = 0.7721537040449675 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 32.42262747020903 H4_P_Y = 101.70061607720164 H4_P_Z = 103.78189763425476 # Orientation: H4_DX_X = -0.9793191653245756 H4_DX_Y = 0.1918267035855763 H4_DX_Z = 0.06431553637696652 H4_DY_X = -0.06676275242267593 H4_DY_Y = -0.6064783111308714 H4_DY_Z = 0.7922921134384779 H4_DZ_X = 0.19098876227912598 H4_DZ_Y = 0.7716129689937503 H4_DZ_Z = 0.6067427121636797 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 11.469908155439363 H5_P_Y = 97.18332494704865 H5_P_Z = 93.81497684418828 # Orientation: H5_DX_X = -0.15312763340198465 H5_DX_Y = 0.9348604191423675 H5_DX_Z = -0.3202934976075369 H5_DY_X = -0.9723661661966148 H5_DY_Y = -0.08473970876615056 H5_DY_Z = 0.21753900936229797 H5_DZ_X = 0.17622703176528987 H5_DZ_Y = 0.34475379400259953 H5_DZ_Z = 0.9220026327489563 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 9.633406632951676 H6_P_Y = 90.24837031698564 H6_P_Z = 72.19269884517712 # Orientation: H6_DX_X = 0.7051518457939743 H6_DX_Y = -0.669838688356819 H6_DX_Z = 0.2325446321757738 H6_DY_X = -0.7067209505664263 H6_DY_Y = -0.6905523740217063 H6_DY_Z = 0.15389254940852481 H6_DZ_X = 0.05750106437129965 H6_DZ_Y = -0.2728617787697374 H6_DZ_Z = -0.9603333157205327 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.617256699817833 H7_P_Y = 99.8123442725978 H7_P_Z = 77.34984352484348 # Orientation: H7_DX_X = 0.9581731606868011 H7_DX_Y = -0.2370082304198462 H7_DX_Z = -0.16040976545312446 H7_DY_X = -0.28168533822077535 H7_DY_Y = -0.880072299345315 H7_DY_Z = -0.3822644610168311 H7_DZ_X = -0.05057236766177198 H7_DZ_Y = 0.4114606258663116 H7_DZ_Z = -0.9100234002435315 ############# END of Description of junction: j11