############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 142 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.58157480018834 H1_P_Y = 128.06029763838612 H1_P_Z = 14.033837327865495 # Orientation: H1_DX_X = 0.11300856106086599 H1_DX_Y = -0.782699312784473 H1_DX_Z = 0.6120546143063397 H1_DY_X = 0.6320529138021698 H1_DY_Y = 0.5319254185076829 H1_DY_Z = 0.5635285825045777 H1_DZ_X = -0.7666408411251879 H1_DZ_Y = 0.32316734815287873 H1_DZ_Z = 0.554819507413626 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 59.75636168647767 H2_P_Y = 118.91445428830716 H2_P_Z = 1.0868774023158672 # Orientation: H2_DX_X = -0.9356741936275412 H2_DX_Y = -0.3522959807941106 H2_DX_Z = 0.02003360416308264 H2_DY_X = -0.23752606258289433 H2_DY_Y = 0.5868341176911542 H2_DY_Z = -0.7740846774788375 H2_DZ_X = 0.26095051824688653 H2_DZ_Y = -0.7290495595156443 H2_DZ_Z = -0.6327650170456041 ############# END of Description of junction: j4