############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS3 FINGERPRINT = 163 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2744 S1_NAME_ID3 = 2752 S1_NUM_ID5_ORIG = 2744 S1_NUM_ID3_ORIG = 2752 S1_NAME2_ID5 = 2746 S1_NAME2_ID3 = 2750 S1_NUM2_ID5_ORIG = 2746 S1_NUM2_ID3_ORIG = 2750 S1_SQ2 = ACGUG S1_SQLEN2 = 5 S1_SQ = GCACGUGCC S1_SQLEN = 9 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2730 S2_NAME_ID3 = 2735 S2_NUM_ID5_ORIG = 2730 S2_NUM_ID3_ORIG = 2735 S2_NAME2_ID5 = 2732 S2_NAME2_ID3 = 2733 S2_NUM2_ID5_ORIG = 2732 S2_NUM2_ID3_ORIG = 2733 S2_SQ2 = UU S2_SQLEN2 = 2 S2_SQ = GGUUGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 2746 H1_OUTID2_ORIG = 2733 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 82.0135146880813 H1_P_Y = 186.8337489302783 H1_P_Z = 105.64942018709642 # Orientation: H1_DX_X = 0.5053403740618876 H1_DX_Y = -0.4653192529314083 H1_DX_Z = -0.726711152518206 H1_DY_X = -0.8124743496131401 H1_DY_Y = 0.027152411429682388 H1_DY_Z = -0.5823642998795862 H1_DZ_X = 0.29071728115761175 H1_DZ_Y = 0.884726364140306 H1_DZ_Z = -0.3643387476393656 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 2732 H2_OUTID2_ORIG = 2750 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 75.28855507230192 H2_P_Y = 175.94293395193003 H2_P_Z = 115.26767339619899 # Orientation: H2_DX_X = 0.9178146259476705 H2_DX_Y = -0.38259253779025926 H2_DX_Z = 0.10601538767433283 H2_DY_X = 0.14983296758281028 H2_DY_Y = 0.5810961959731458 H2_DY_Z = 0.7999233043554028 H2_DZ_X = -0.3676498255430829 H2_DZ_Y = -0.7182967082291043 H2_DZ_Z = 0.5906635630588397 ############# END of Description of junction: j28