############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:39:40:44:61:65:66:77:92:99:103:103:118:125:129:131:134:142:143:155:164 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.94784383366201 H1_P_Y = 90.7563507011525 H1_P_Z = 80.75148782859827 # Orientation: H1_DX_X = 0.10323590327725896 H1_DX_Y = -0.9931156414510554 H1_DX_Z = 0.05535043793678085 H1_DY_X = 0.2304974534126103 H1_DY_Y = -0.030246602598225536 H1_DY_Z = -0.9726027282511467 H1_DZ_X = 0.9675811450440861 H1_DZ_Y = 0.11316565617063645 H1_DZ_Z = 0.22578809095840313 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.98801689896226 H2_P_Y = 82.98312482142417 H2_P_Z = 70.58187905825885 # Orientation: H2_DX_X = -0.41841841453322814 H2_DX_Y = 0.43888590586641385 H2_DX_Z = 0.7951762018642938 H2_DY_X = -0.34938731486587216 H2_DY_Y = 0.7303521418611183 H2_DY_Z = -0.5869533653448826 H2_DZ_X = -0.8383642016393082 H2_DZ_Y = -0.5234165745471557 H2_DZ_Z = -0.15225161706533186 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.581965344882434 H3_P_Y = 89.00026591671907 H3_P_Z = 97.67091482651158 # Orientation: H3_DX_X = -0.2182744216304897 H3_DX_Y = 0.9159188734046069 H3_DX_Z = 0.3368217543495575 H3_DY_X = -0.749041938707002 H3_DY_Y = -0.3784750388224296 H3_DY_Z = 0.5437764421583751 H3_DZ_X = 0.6255337328393509 H3_DZ_Y = -0.13360113146828212 H3_DZ_Z = 0.7686730688338628 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.06378127778856 H4_P_Y = 101.25575945572547 H4_P_Z = 104.074109587539 # Orientation: H4_DX_X = -0.9794011351370742 H4_DX_Y = 0.18974045120404526 H4_DX_Z = 0.0690795025248434 H4_DY_X = -0.0643346298291263 H4_DY_Y = -0.6174940711516683 H4_DY_Z = 0.7839401300464743 H4_DZ_X = 0.19140133723918495 H4_DZ_Y = 0.7633476490233164 H4_DZ_Z = 0.6169812759181923 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.144247933016597 H5_P_Y = 96.45748312397191 H5_P_Z = 94.10548357079853 # Orientation: H5_DX_X = -0.14041454753816396 H5_DX_Y = 0.937856725717424 H5_DX_Z = -0.3173460522304481 H5_DY_X = -0.9731738192169441 H5_DY_Y = -0.07173277766970898 H5_DY_Z = 0.21860266740937107 H5_DZ_X = 0.18225386808063604 H5_DZ_Y = 0.33952786429745174 H5_DZ_Z = 0.9227699371648725 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 9.896944482021965 H6_P_Y = 89.8079763712357 H6_P_Z = 72.59206314754503 # Orientation: H6_DX_X = 0.692925265435548 H6_DX_Y = -0.6671861572354203 H6_DX_Z = 0.273344486160795 H6_DY_X = -0.715593122273269 H6_DY_Y = -0.682763564587006 H6_DY_Z = 0.14751406111837184 H6_DZ_X = 0.08821031615559782 H6_DZ_Y = -0.297819654263904 H6_DZ_Z = -0.9505379496147697 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.702627835121355 H7_P_Y = 99.26164044845736 H7_P_Z = 77.64215548659605 # Orientation: H7_DX_X = 0.9626233951842096 H7_DX_Y = -0.20661050125288227 H7_DX_Z = -0.17512367006220586 H7_DY_X = -0.2618335784101582 H7_DY_Y = -0.8752868846602126 H7_DY_Z = -0.40659076078873113 H7_DZ_X = -0.0692775307076623 H7_DZ_Y = 0.4372470357976823 H7_DZ_Z = -0.8966691995519795 ############# END of Description of junction: j13