############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS3 FINGERPRINT = 165 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2744 S1_NAME_ID3 = 2752 S1_NUM_ID5_ORIG = 2744 S1_NUM_ID3_ORIG = 2752 S1_NAME2_ID5 = 2746 S1_NAME2_ID3 = 2750 S1_NUM2_ID5_ORIG = 2746 S1_NUM2_ID3_ORIG = 2750 S1_SQ2 = ACGUG S1_SQLEN2 = 5 S1_SQ = GCACGUGCC S1_SQLEN = 9 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2730 S2_NAME_ID3 = 2735 S2_NUM_ID5_ORIG = 2730 S2_NUM_ID3_ORIG = 2735 S2_NAME2_ID5 = 2732 S2_NAME2_ID3 = 2733 S2_NUM2_ID5_ORIG = 2732 S2_NUM2_ID3_ORIG = 2733 S2_SQ2 = UU S2_SQLEN2 = 2 S2_SQ = GGUUGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 2746 H1_OUTID2_ORIG = 2733 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 81.92661432389365 H1_P_Y = 187.10700321504643 H1_P_Z = 105.23316433636309 # Orientation: H1_DX_X = 0.5094316698936723 H1_DX_Y = -0.47799223376696887 H1_DX_Z = -0.715543708076467 H1_DY_X = -0.8127101736303644 H1_DY_Y = 0.006029192267249073 H1_DY_Z = -0.5826369560183338 H1_DZ_X = 0.28281009067399054 H1_DZ_Y = 0.8783433686771218 H1_DZ_Z = -0.38539768981389955 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 2732 H2_OUTID2_ORIG = 2750 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 75.20578150270522 H2_P_Y = 175.87122982369985 H2_P_Z = 114.9213868966134 # Orientation: H2_DX_X = 0.9132208310450665 H2_DX_Y = -0.3881604516416246 H2_DX_Z = 0.12393214888281534 H2_DY_X = 0.13521398371531745 H2_DY_Y = 0.57560680247866 H2_DY_Z = 0.80647007852005 H2_DZ_X = -0.38437597785654987 H2_DZ_Y = -0.7197279157582273 H2_DZ_Z = 0.5781408435019557 ############# END of Description of junction: j28