#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS4HS5
FINGERPRINT = 59:122:171
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  321
S1_NAME_ID3 = 325
S1_NUM_ID5_ORIG =  321
S1_NUM_ID3_ORIG = 325
S1_NAME2_ID5 =  322
S1_NAME2_ID3 = 324
S1_NUM2_ID5_ORIG =  322
S1_NUM2_ID3_ORIG = 324
S1_SQ2 = GCG
S1_SQLEN2 = 3
S1_SQ = AGCGU
S1_SQLEN = 5
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  303
S2_NAME_ID3 = 310
S2_NUM_ID5_ORIG =  303
S2_NUM_ID3_ORIG = 310
S2_NAME2_ID5 =  304
S2_NAME2_ID3 = 309
S2_NUM2_ID5_ORIG =  304
S2_NUM2_ID3_ORIG = 309
S2_SQ2 = GAAGUC
S2_SQLEN2 = 6
S2_SQ = CGAAGUCU
S2_SQLEN = 8
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  340
S3_NAME_ID3 = 348
S3_NUM_ID5_ORIG =  340
S3_NUM_ID3_ORIG = 348
S3_NAME2_ID5 =  341
S3_NAME2_ID3 = 347
S3_NUM2_ID5_ORIG =  341
S3_NUM2_ID3_ORIG = 347
S3_SQ2 = CCCCGUA
S3_SQLEN2 = 7
S3_SQ = ACCCCGUAC
S3_SQLEN = 9
S3_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 2
H1_OUTID2 = 7
H1_INID2_ORIG = 322
H1_OUTID2_ORIG = 309
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 3.624973506237504
H1_P_Y = 139.75307556194596
H1_P_Z = 39.77623623402899
# Orientation:
H1_DX_X = -0.7514213248017261
H1_DX_Y = 0.48961529290389194
H1_DX_Z = -0.4423153372740387
H1_DY_X = -0.6477855646875064
H1_DY_Y = -0.4199520278588409
H1_DY_Z = 0.635621079323009
H1_DZ_X = 0.12545857808734429
H1_DZ_Y = 0.764144724022799
H1_DZ_Z = 0.6327266281202313
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 341
H2_OUTID2_ORIG = 324
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 5.004741046676289
H2_P_Y = 127.8723055836419
H2_P_Z = 32.127232057726694
# Orientation:
H2_DX_X = -0.20992733719109324
H2_DX_Y = 0.5110419344788255
H2_DX_Z = -0.8335266368293084
H2_DY_X = 0.9729090115563581
H2_DY_Y = 0.024744558615509504
H2_DY_Z = -0.2298603098652734
H2_DZ_X = -0.09684300869084606
H2_DZ_Y = -0.8591995391194303
H2_DZ_Z = -0.5023918626377792
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 304
H3_OUTID2_ORIG = 347
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 30.230170916508442
H3_P_Y = 132.53056696356592
H3_P_Z = 21.08273216192417
# Orientation:
H3_DX_X = -0.6034858953709552
H3_DX_Y = -0.7146758686553198
H3_DX_Z = -0.35361444660825825
H3_DY_X = -0.2629708271720119
H3_DY_Y = 0.5970482237031547
H3_DY_Z = -0.7578784616476213
H3_DZ_X = 0.7527623251364197
H3_DZ_Y = -0.3643786784852239
H3_DZ_Z = -0.5482490862013094
#############  END of Description of junction: j9