#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 11:74:78:79:88:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.33287417451433
H1_P_Y = 126.48155153623917
H1_P_Z = 37.10314759400774
# Orientation:
H1_DX_X = -0.1869717625051237
H1_DX_Y = -0.9310719233810261
H1_DX_Z = 0.3132836311033458
H1_DY_X = -0.5829648063395538
H1_DY_Y = -0.15152287812635734
H1_DY_Z = -0.7982436044052008
H1_DZ_X = 0.7906918455347949
H1_DZ_Y = -0.33188234495959534
H1_DZ_Z = -0.5144516639188836
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.16161677941556
H2_P_Y = 143.4902903451039
H2_P_Z = 55.8603690029581
# Orientation:
H2_DX_X = -0.6353544614499356
H2_DX_Y = 0.4245296527722644
H2_DX_Z = 0.6450575805559708
H2_DY_X = 0.24964361139413427
H2_DY_Y = -0.6775560869880906
H2_DY_Z = 0.691806198494568
H2_DZ_X = 0.7307549353960994
H2_DZ_Y = 0.6005766586393975
H2_DZ_Z = 0.32450716708847693
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.048485697462308
H3_P_Y = 170.84346336164805
H3_P_Z = 66.24675445033368
# Orientation:
H3_DX_X = -0.7256102147223231
H3_DX_Y = 0.6733319365377497
H3_DX_Z = -0.1418235506850607
H3_DY_X = -0.3518895530668864
H3_DY_Y = -0.18598366111265818
H3_DY_Z = 0.9173787768645667
H3_DZ_X = 0.5913235651764666
H3_DZ_Y = 0.7155656371273267
H3_DZ_Z = 0.37189011848875
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.650509596652977
H4_P_Y = 141.02120224563163
H4_P_Z = 69.1192274314388
# Orientation:
H4_DX_X = -0.7558851319828435
H4_DX_Y = -0.64101362240703
H4_DX_Z = -0.1331885998721276
H4_DY_X = 0.5978423100447188
H4_DY_Y = -0.7587266696721713
H4_DY_Z = 0.25868593515797045
H4_DZ_X = -0.26687495118065385
H4_DZ_Y = 0.11591107201982709
H4_DZ_Z = 0.9567352736340098
#############  END of Description of junction: j1