############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 31:39:40:42:61:65:65:78:93:100:102:103:118:124:130:131:134:141:142:155:164 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.93037297925561 H1_P_Y = 90.75131765028226 H1_P_Z = 80.9889456682619 # Orientation: H1_DX_X = 0.11552555894959937 H1_DX_Y = -0.9920432132383041 H1_DX_Z = 0.05004106610768133 H1_DY_X = 0.2396304723248548 H1_DY_Y = -0.021055742967121205 H1_DY_Z = -0.9706358186371773 H1_DZ_X = 0.9639663282307893 H1_DZ_Y = 0.12412460979157913 H1_DZ_Z = 0.23529130727959569 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.9456138295206 H2_P_Y = 83.18959059943714 H2_P_Z = 70.71676277122356 # Orientation: H2_DX_X = -0.4121757717942103 H2_DX_Y = 0.4168310823470023 H2_DX_Z = 0.810162318264247 H2_DY_X = -0.3714715999191114 H2_DY_Y = 0.7350614974354528 H2_DY_Z = -0.5671802583319447 H2_DZ_X = -0.8319374877954431 H2_DZ_Y = -0.5347302532841951 H2_DZ_Z = -0.1481336309661998 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.632348521905676 H3_P_Y = 89.22037933887768 H3_P_Z = 97.83891886037826 # Orientation: H3_DX_X = -0.2197428135678834 H3_DX_Y = 0.9171139060527622 H3_DX_Z = 0.3325886035478618 H3_DY_X = -0.751962278721706 H3_DY_Y = -0.3764234461183946 H3_DY_Z = 0.5411636726462916 H3_DZ_X = 0.6215028779216851 H3_DZ_Y = -0.13117725617269116 H3_DZ_Z = 0.7723514097857702 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 32.96170184820029 H4_P_Y = 101.47359390660583 H4_P_Z = 104.09275006952747 # Orientation: H4_DX_X = -0.9813247229733051 H4_DX_Y = 0.17076998945573507 H4_DX_Z = 0.08854037939070736 H4_DY_X = -0.035654304898571354 H4_DY_Y = -0.6137905510227171 H4_DY_Z = 0.7886633819427828 H4_DZ_X = 0.18902528567247856 H4_DZ_Y = 0.7707780291215585 H4_DZ_Z = 0.6084165277175799 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.343939799090812 H5_P_Y = 96.76545513928444 H5_P_Z = 94.18746689040839 # Orientation: H5_DX_X = -0.15129499745361308 H5_DX_Y = 0.9358179734718846 H5_DX_Z = -0.31836228462630345 H5_DY_X = -0.9727040890656831 H5_DY_Y = -0.08361977515933461 H5_DY_Z = 0.21645897606062192 H5_DZ_X = 0.17594481765717518 H5_DZ_Y = 0.34242145629220033 H5_DZ_Z = 0.9229252230870628 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.162511407298645 H6_P_Y = 89.79027482284783 H6_P_Z = 72.84803391170969 # Orientation: H6_DX_X = 0.6980957173722686 H6_DX_Y = -0.6675691782431556 H6_DX_Z = 0.2588701636849322 H6_DY_X = -0.7099167752180175 H6_DY_Y = -0.6923841523222762 H6_DY_Z = 0.12892772346172876 H6_DZ_X = 0.09316942444041842 H6_DZ_Y = -0.27378016340254874 H6_DZ_Z = -0.95726896976592 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.98330840427695 H7_P_Y = 99.4688954330772 H7_P_Z = 77.67138543947877 # Orientation: H7_DX_X = 0.9587722617104681 H7_DX_Y = -0.2305736816907853 H7_DX_Z = -0.16610697603097435 H7_DY_X = -0.27888359650934547 H7_DY_Y = -0.8757190100366756 H7_DY_Z = -0.3941321543066323 H7_DZ_X = -0.05458653471882258 H7_DZ_Y = 0.4242074878782063 H7_DZ_Z = -0.9039183134860451 ############# END of Description of junction: j13