############# Start of Description of junction: j56 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS12HS1HS2 FINGERPRINT = 19:27:46:61:123:147:150:156:159:172 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1945 S1_NAME_ID3 = 1948 S1_NUM_ID5_ORIG = 1945 S1_NUM_ID3_ORIG = 1948 S1_NAME2_ID5 = 1946 S1_NAME2_ID3 = 1947 S1_NUM2_ID5_ORIG = 1946 S1_NUM2_ID3_ORIG = 1947 S1_SQ2 = CG S1_SQLEN2 = 2 S1_SQ = GCGG S1_SQLEN = 4 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1888 S2_NAME_ID3 = 1892 S2_NUM_ID5_ORIG = 1888 S2_NUM_ID3_ORIG = 1892 S2_NAME2_ID5 = 1889 S2_NAME2_ID3 = 1891 S2_NUM2_ID5_ORIG = 1889 S2_NUM2_ID3_ORIG = 1891 S2_SQ2 = CUG S2_SQLEN2 = 3 S2_SQ = CCUGC S2_SQLEN = 5 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1964 S3_NAME_ID3 = 1967 S3_NUM_ID5_ORIG = 1964 S3_NUM_ID3_ORIG = 1967 S3_NAME2_ID5 = 1965 S3_NAME2_ID3 = 1966 S3_NUM2_ID5_ORIG = 1965 S3_NUM2_ID3_ORIG = 1966 S3_SQ2 = CU S3_SQLEN2 = 2 S3_SQ = UCUU S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1969 S4_NAME_ID3 = 1973 S4_NUM_ID5_ORIG = 1969 S4_NUM_ID3_ORIG = 1973 S4_NAME2_ID5 = 1970 S4_NAME2_ID3 = 1972 S4_NUM2_ID5_ORIG = 1970 S4_NUM2_ID3_ORIG = 1972 S4_SQ2 = GGU S4_SQLEN2 = 3 S4_SQ = AGGUA S4_SQLEN = 5 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 2009 S5_NAME_ID3 = 2014 S5_NUM_ID5_ORIG = 2009 S5_NUM_ID3_ORIG = 2014 S5_NAME2_ID5 = 2010 S5_NAME2_ID3 = 2013 S5_NUM2_ID5_ORIG = 2010 S5_NUM2_ID3_ORIG = 2013 S5_SQ2 = AAUG S5_SQLEN2 = 4 S5_SQ = GAAUGG S5_SQLEN = 6 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 5 H1_INID2 = 2 H1_OUTID2 = 4 H1_INID2_ORIG = 1946 H1_OUTID2_ORIG = 1891 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 114.99949130367695 H1_P_Y = 112.8317558757388 H1_P_Z = 88.24797667385224 # Orientation: H1_DX_X = 0.7038912875902383 H1_DX_Y = -0.5190090036721386 H1_DX_Z = 0.48493990283517974 H1_DY_X = -0.5807117793432184 H1_DY_Y = -0.8136314161595806 H1_DY_Z = -0.02788813314299432 H1_DZ_X = 0.40903653209288393 H1_DZ_Y = -0.2619800999034396 H1_DZ_Z = -0.874102707162038 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1965 H2_OUTID2_ORIG = 1947 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 116.83683205814911 H2_P_Y = 99.0648060919025 H2_P_Z = 102.45800309069001 # Orientation: H2_DX_X = -0.9733503850483913 H2_DX_Y = -0.17630326051916256 H2_DX_Z = 0.146649883247278 H2_DY_X = 0.19119171884945274 H2_DY_Y = -0.9769997533479824 H2_DY_Z = 0.09443097268042777 H2_DZ_X = 0.12662841138354963 H2_DZ_Y = 0.11995266686611217 H2_DZ_Z = 0.9846708095308685 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 1970 H3_OUTID2_ORIG = 1966 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 118.00366139817343 H3_P_Y = 92.41095751664236 H3_P_Z = 89.93535172315057 # Orientation: H3_DX_X = -0.9623327743604477 H3_DX_Y = 0.27151417525826105 H3_DX_Z = -0.013988710646316349 H3_DY_X = 0.27184884145749777 H3_DY_Y = 0.9602640919807328 H3_DY_Z = -0.06317500336859894 H3_DZ_X = -0.003720052409789787 H3_DZ_Y = -0.06459819104462383 H3_DZ_Z = -0.9979044217377862 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 2010 H4_OUTID2_ORIG = 1972 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 113.28339346844565 H4_P_Y = 111.78033248133734 H4_P_Z = 104.6686983213586 # Orientation: H4_DX_X = 0.8797140518557711 H4_DX_Y = 0.4387106595714698 H4_DX_Z = -0.18340159253907018 H4_DY_X = -0.47522936736612564 H4_DY_Y = 0.79809308346195 H4_DY_Z = -0.3704112289374706 H4_DZ_X = -0.01613181205850367 H4_DZ_Y = 0.41301378585774273 H4_DZ_Z = 0.9105818894153117 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 6 H5_INID2 = 2 H5_OUTID2 = 5 H5_INID2_ORIG = 1889 H5_OUTID2_ORIG = 2013 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 114.37216931739863 H5_P_Y = 128.50473129717457 H5_P_Z = 92.45110469492332 # Orientation: H5_DX_X = -0.2632329418690631 H5_DX_Y = -0.827869437364285 H5_DX_Z = 0.4953186984085107 H5_DY_X = 0.6827473668756028 H5_DY_Y = 0.20287565528960272 H5_DY_Z = 0.7019241422797933 H5_DZ_X = -0.6815896502584167 H5_DZ_Y = 0.5229470940439 H5_DZ_Z = 0.5118221229017621 ############# END of Description of junction: j56