############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 62:127:170 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 54.47029725748296 H1_P_Y = 155.31391110353735 H1_P_Z = 42.57291731809736 # Orientation: H1_DX_X = 0.16634111858759582 H1_DX_Y = 0.8499946123892528 H1_DX_Z = -0.4998397655011857 H1_DY_X = -0.7309962728950978 H1_DY_Y = -0.2339096463884971 H1_DY_Z = -0.6410387869231187 H1_DZ_X = -0.661796858016487 H1_DZ_Y = 0.4720121145009557 H1_DZ_Z = 0.5824341014087722 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 47.12160491049677 H2_P_Y = 152.4530611471007 H2_P_Z = 20.79519555915989 # Orientation: H2_DX_X = 0.42753027651271935 H2_DX_Y = 0.7812631095440281 H2_DX_Z = -0.45480305224412376 H2_DY_X = 0.20491842266361004 H2_DY_Y = -0.5737585078701102 H2_DY_Z = -0.7929751665088531 H2_DZ_X = -0.8804693650082385 H2_DZ_Y = 0.2458233681167883 H2_DZ_Z = -0.4053943376142648 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 67.71557557911422 H3_P_Y = 148.26020389240568 H3_P_Z = 31.629711728661817 # Orientation: H3_DX_X = 0.6291387481941797 H3_DX_Y = 0.4304456986026537 H3_DX_Z = 0.6472255681562302 H3_DY_X = -0.09622516353951482 H3_DY_Y = -0.783130638767318 H3_DY_Z = 0.6143672521592336 H3_DZ_X = 0.7713139136709941 H3_DZ_Y = -0.44880163009773355 H3_DZ_Z = -0.45127812200365014 ############# END of Description of junction: j1