############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 14:22:154:158:169:176 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 97.30113916071333 H1_P_Y = 139.18911280709625 H1_P_Z = 91.64113409318738 # Orientation: H1_DX_X = -0.09470252229908738 H1_DX_Y = 0.26110813101917074 H1_DX_Z = -0.9606528905832192 H1_DY_X = -0.4517370724151988 H1_DY_Y = -0.8711889619688122 H1_DY_Z = -0.1922587057832743 H1_DZ_X = -0.8871105058987467 H1_DZ_Y = 0.4157551400276134 H1_DZ_Z = 0.20045601478798858 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 110.76240994327314 H2_P_Y = 129.98219336052082 H2_P_Z = 77.81570801348906 # Orientation: H2_DX_X = 0.6477112361167485 H2_DX_Y = 0.5955983909375391 H2_DX_Z = 0.47511336680913985 H2_DY_X = 0.21096623048184426 H2_DY_Y = -0.7394245494829192 H2_DY_Z = 0.6393313579187634 H2_DZ_X = 0.7320952152584965 H2_DZ_Y = -0.31386922807851647 H2_DZ_Z = -0.6045847363778023 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 113.41384222598792 H3_P_Y = 129.21453075475404 H3_P_Z = 93.03819573540105 # Orientation: H3_DX_X = 0.5014129012079565 H3_DX_Y = 0.8415845497795544 H3_DX_Z = -0.20079977110184188 H3_DY_X = 0.5317467490320098 H3_DY_Y = -0.11667050337277374 H3_DY_Z = 0.8388285811395804 H3_DZ_X = 0.6825177634289901 H3_DZ_Y = -0.5273740979751267 H3_DZ_Z = -0.5060099439623684 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 104.39217313109198 H4_P_Y = 139.54219136971645 H4_P_Z = 103.85895036174715 # Orientation: H4_DX_X = -0.35272316868733355 H4_DX_Y = 0.48047157782252725 H4_DX_Z = -0.8029529433135565 H4_DY_X = -0.5527653791123157 H4_DY_Y = -0.7993669554626024 H4_DY_Z = -0.23550563935764046 H4_DZ_X = -0.7550078158045608 H4_DZ_Y = 0.3607762927620968 H4_DZ_Z = 0.5475432993424931 ############# END of Description of junction: j53