#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 11:75:77:78:85:136
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.40329404018897
H1_P_Y = 126.28138135215185
H1_P_Z = 37.36987285440244
# Orientation:
H1_DX_X = -0.18482621788593434
H1_DX_Y = -0.9368186569266186
H1_DX_Z = 0.2970018067557447
H1_DY_X = -0.5705911463733457
H1_DY_Y = -0.14376465299432084
H1_DY_Z = -0.8085526997232648
H1_DZ_X = 0.8001656158960699
H1_DZ_Y = -0.3189083388430305
H1_DZ_Z = -0.5079689543210719
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 62.98791648151731
H2_P_Y = 143.38201537519234
H2_P_Z = 55.800865671677755
# Orientation:
H2_DX_X = -0.6298525713291738
H2_DX_Y = 0.41543818291756907
H2_DX_Z = 0.6562749839542548
H2_DY_X = 0.24110657577818273
H2_DY_Y = -0.698621281137008
H2_DY_Z = 0.6736437668820159
H2_DZ_X = 0.7383450125155164
H2_DZ_Y = 0.5825284728805968
H2_DZ_Z = 0.3398635325786685
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.076113476679446
H3_P_Y = 170.6091889761989
H3_P_Z = 66.20649363228289
# Orientation:
H3_DX_X = -0.7180142750422895
H3_DX_Y = 0.6817941513510846
H3_DX_Z = -0.14004369324938182
H3_DY_X = -0.3386395271911482
H3_DY_Y = -0.16640767155340086
H3_DY_Z = 0.9260840984877916
H3_DZ_X = 0.6080943770988547
H3_DZ_Y = 0.712365932671986
H3_DZ_Z = 0.3503655327071158
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.520034380551028
H4_P_Y = 140.886415118861
H4_P_Z = 69.39193758529946
# Orientation:
H4_DX_X = -0.7460586040157153
H4_DX_Y = -0.6558081744037452
H4_DX_Z = -0.1153784978206005
H4_DY_X = 0.6175141129851163
H4_DY_Y = -0.7462345828193406
H4_DY_Z = 0.24861670834569338
H4_DZ_X = -0.24914429481394862
H4_DZ_Y = 0.1142347836241413
H4_DZ_Z = 0.9617055342317684
#############  END of Description of junction: j1