############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS3 FINGERPRINT = 164 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2744 S1_NAME_ID3 = 2752 S1_NUM_ID5_ORIG = 2744 S1_NUM_ID3_ORIG = 2752 S1_NAME2_ID5 = 2746 S1_NAME2_ID3 = 2750 S1_NUM2_ID5_ORIG = 2746 S1_NUM2_ID3_ORIG = 2750 S1_SQ2 = ACGUG S1_SQLEN2 = 5 S1_SQ = GCACGUGCC S1_SQLEN = 9 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 2730 S2_NAME_ID3 = 2735 S2_NUM_ID5_ORIG = 2730 S2_NUM_ID3_ORIG = 2735 S2_NAME2_ID5 = 2732 S2_NAME2_ID3 = 2733 S2_NUM2_ID5_ORIG = 2732 S2_NUM2_ID3_ORIG = 2733 S2_SQ2 = UU S2_SQLEN2 = 2 S2_SQ = GGUUGU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 2746 H1_OUTID2_ORIG = 2733 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 81.91368159751103 H1_P_Y = 187.1940199963991 H1_P_Z = 105.47623418006405 # Orientation: H1_DX_X = 0.5092620127364427 H1_DX_Y = -0.48106710537638264 H1_DX_Z = -0.7136011788866483 H1_DY_X = -0.8131337506359557 H1_DY_Y = 0.0026365592348440714 H1_DY_Z = -0.5820709167550859 H1_DZ_X = 0.2818966228253572 H1_DZ_Y = 0.8766798096683601 H1_DZ_Z = -0.38982920023964596 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 2732 H2_OUTID2_ORIG = 2750 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 75.01380993668315 H2_P_Y = 175.94011936159123 H2_P_Z = 115.5228573083241 # Orientation: H2_DX_X = 0.9158539235046703 H2_DX_Y = -0.38851832125968144 H2_DX_Z = 0.10131685371483456 H2_DY_X = 0.16013591099901703 H2_DY_Y = 0.5848522162979748 H2_DY_Z = 0.7951756881971761 H2_DZ_X = -0.36819570992835793 H2_DZ_Y = -0.7120403072417218 H2_DZ_Z = 0.5978549322816207 ############# END of Description of junction: j28