#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 11:74:77:79:88:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.08197838074591
H1_P_Y = 126.36181771930882
H1_P_Z = 37.39948652880899
# Orientation:
H1_DX_X = -0.19594136368647952
H1_DX_Y = -0.929850729966887
H1_DX_Z = 0.31142350903027705
H1_DY_X = -0.5726252920442505
H1_DY_Y = -0.1493133920503169
H1_DY_Z = -0.8061053193383998
H1_DZ_X = 0.7960573201145209
H1_DZ_Y = -0.3362783533540039
H1_DZ_Z = -0.5031993761498583
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.23535490866351
H2_P_Y = 143.47451799769132
H2_P_Z = 56.01636016106622
# Orientation:
H2_DX_X = -0.628036191311601
H2_DX_Y = 0.41092200613775276
H2_DX_Z = 0.660843133636547
H2_DY_X = 0.2544070846159272
H2_DY_Y = -0.69412834438603
H2_DY_Z = 0.6733965227242749
H2_DZ_X = 0.7354234002940387
H2_DZ_Y = 0.5910405623911572
H2_DZ_Z = 0.3313962521035947
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.230627497602175
H3_P_Y = 170.86899414550751
H3_P_Z = 66.35993161996171
# Orientation:
H3_DX_X = -0.7350562237993792
H3_DX_Y = 0.6658762614350735
H3_DX_Z = -0.1276759660666471
H3_DY_X = -0.33564609972548
H3_DY_Y = -0.19376169139616195
H3_DY_Z = 0.9218449450348913
H3_DZ_X = 0.5890959544869396
H3_DZ_Y = 0.7204618042648292
H3_DZ_Z = 0.3659245072451114
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.568592925992355
H4_P_Y = 141.07738685794095
H4_P_Z = 69.38739272658539
# Orientation:
H4_DX_X = -0.7562382330007509
H4_DX_Y = -0.6404379426882656
H4_DX_Z = -0.13395139608499562
H4_DY_X = 0.598998481709188
H4_DY_Y = -0.7600327439164403
H4_DY_Z = 0.2520933301079964
H4_DZ_X = -0.26325758081769735
H4_DZ_Y = 0.11040593163440349
H4_DZ_Z = 0.9583871745813184
#############  END of Description of junction: j1