#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:73:78:79:86:137
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.45455995014549
H1_P_Y = 126.92235929931172
H1_P_Z = 37.180872968225785
# Orientation:
H1_DX_X = -0.18453805380190147
H1_DX_Y = -0.9311933654873457
H1_DX_Z = 0.3143638382055798
H1_DY_X = -0.5700225828219203
H1_DY_Y = -0.1591583874967455
H1_DY_Z = -0.8060662893102872
H1_DZ_X = 0.8006372223248377
H1_DZ_Y = -0.32794439126439556
H1_DZ_Z = -0.501430468226836
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.492067985045885
H2_P_Y = 143.77605502878308
H2_P_Z = 55.900447866827506
# Orientation:
H2_DX_X = -0.6449938481450204
H2_DX_Y = 0.4205895504314583
H2_DX_Z = 0.6380339849278869
H2_DY_X = 0.25409203833937966
H2_DY_Y = -0.6693804614785961
H2_DY_Z = 0.6981167766521992
H2_DZ_X = 0.7207081045108552
H2_DZ_Y = 0.6124003819876123
H2_DZ_Z = 0.324877823548789
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.23650539399226
H3_P_Y = 171.36603810632394
H3_P_Z = 66.40784134208612
# Orientation:
H3_DX_X = -0.716127538229756
H3_DX_Y = 0.6859798974338958
H3_DX_Z = -0.12881354472862938
H3_DY_X = -0.34660357317627444
H3_DY_Y = -0.1893209851184281
H3_DY_Z = 0.9187075310757109
H3_DZ_X = 0.6058277907544465
H3_DZ_Y = 0.7025589974588229
H3_DZ_Z = 0.3733410545857794
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.785618032370984
H4_P_Y = 141.2629501450119
H4_P_Z = 69.43417572388049
# Orientation:
H4_DX_X = -0.7574712463471336
H4_DX_Y = -0.641147864853906
H4_DX_Z = -0.12315326366206136
H4_DY_X = 0.5985521334459776
H4_DY_Y = -0.7573139688623485
H4_DY_Z = 0.2611721579977626
H4_DZ_X = -0.2607156583418231
H4_DZ_Y = 0.12411675132398159
H4_DZ_Z = 0.9574039782328896
#############  END of Description of junction: j1