############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 142 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.2375700546783 H1_P_Y = 127.92125499247675 H1_P_Z = 14.200747494382519 # Orientation: H1_DX_X = 0.1051340887010781 H1_DX_Y = -0.7974201296085255 H1_DX_Z = 0.5941952206877144 H1_DY_X = 0.6313630006129074 H1_DY_Y = 0.5151618454047195 H1_DY_Z = 0.5796456111248283 H1_DZ_X = -0.7683277847703209 H1_DZ_Y = 0.3142123643880552 H1_DZ_Z = 0.5576226369289596 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 59.64706262622332 H2_P_Y = 118.74184338067609 H2_P_Z = 1.027591369462165 # Orientation: H2_DX_X = -0.9390553021980281 H2_DX_Y = -0.34372120174353427 H2_DX_Z = -0.005556517411720696 H2_DY_X = -0.22057989403859324 H2_DY_Y = 0.6148699796106456 H2_DY_Z = -0.7571521765930033 H2_DZ_X = 0.2636657917889309 H2_DZ_Y = -0.7097821099785477 H2_DZ_Z = -0.6532149007751786 ############# END of Description of junction: j4