############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 29:39:41:44:60:63:64:76:92:102:102:103:118:124:131:131:133:143:143:157:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.68994663683984 H1_P_Y = 90.96901991835408 H1_P_Z = 80.75745681384997 # Orientation: H1_DX_X = 0.14183804851247572 H1_DX_Y = -0.9866358498177163 H1_DX_Z = 0.08019767982082726 H1_DY_X = 0.24158470552877986 H1_DY_Y = -0.04406491157320147 H1_DY_Z = -0.9693787255880011 H1_DZ_X = 0.959957706385417 H1_DZ_Y = 0.15686931957051797 H1_DZ_Z = 0.23210605017693808 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.92450706406212 H2_P_Y = 83.1446781834414 H2_P_Z = 70.63139851703339 # Orientation: H2_DX_X = -0.4157585999900064 H2_DX_Y = 0.43246865432217874 H2_DX_Z = 0.8000722777119051 H2_DY_X = -0.3558062287505095 H2_DY_Y = 0.7322478280684521 H2_DY_Z = -0.5807022006772229 H2_DZ_X = -0.8369866869411311 H2_DZ_Y = -0.5261026338251753 H2_DZ_Z = -0.15056329089628662 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.748697022918215 H3_P_Y = 88.99701081649953 H3_P_Z = 97.80621028393583 # Orientation: H3_DX_X = -0.22906679140751152 H3_DX_Y = 0.9116748982449536 H3_DX_Z = 0.3411411511153659 H3_DY_X = -0.7518014480120883 H3_DY_Y = -0.3883127515593685 H3_DY_Z = 0.5329238123252793 H3_DZ_X = 0.6183227214337137 H3_DZ_Y = -0.13439526363103482 H3_DZ_Z = 0.7743480646791454 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.03872792955794 H4_P_Y = 101.1874895373353 H4_P_Z = 104.06177006780153 # Orientation: H4_DX_X = -0.9794386698260311 H4_DX_Y = 0.18958404058953704 H4_DX_Z = 0.0689766888387453 H4_DY_X = -0.06434324603006303 H4_DY_Y = -0.6176038920521023 H4_DY_Z = 0.7838529066173123 H4_DZ_X = 0.1912062727520336 H4_DZ_Y = 0.7632976641362461 H4_DZ_Z = 0.6171035870779207 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.065682897287001 H5_P_Y = 96.57510711086019 H5_P_Z = 94.14382666614536 # Orientation: H5_DX_X = -0.16568734722887335 H5_DX_Y = 0.929357095606747 H5_DX_Z = -0.32991376420764595 H5_DY_X = -0.9697770337104945 H5_DY_Y = -0.09278538481390797 H5_DY_Z = 0.2256620864314982 H5_DZ_X = 0.17910948566712115 H5_DZ_Y = 0.3573321441045181 H5_DZ_Z = 0.9166425317067279 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 9.92273707441868 H6_P_Y = 89.6722174307834 H6_P_Z = 72.63689519571388 # Orientation: H6_DX_X = 0.6869590169026658 H6_DX_Y = -0.678024651811171 H6_DX_Z = 0.26147634813204945 H6_DY_X = -0.7236562621857274 H6_DY_Y = -0.6711448162812701 H6_DY_Z = 0.1608920438621908 H6_DZ_X = 0.06639972361013946 H6_DZ_Y = -0.29974523701824296 H6_DZ_Z = -0.9517057683913492 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.82969665304223 H7_P_Y = 99.24842785666179 H7_P_Z = 77.61503292957482 # Orientation: H7_DX_X = 0.9597819599752029 H7_DX_Y = -0.21795208477591643 H7_DX_Z = -0.17696179827294145 H7_DY_X = -0.27284470840450226 H7_DY_Y = -0.872630220766581 H7_DY_Z = -0.405058345057256 H7_DZ_X = -0.06613890233304431 H7_DZ_Y = 0.43705078257187324 H7_DZ_Z = -0.8970018166377827 ############# END of Description of junction: j13