############# Start of Description of junction: j12 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS10HS4HS1 FINGERPRINT = 45:64:68:137:146:153 LOOP_LENGTH_SUM = 15 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 554 S1_NAME_ID3 = 569 S1_NUM_ID5_ORIG = 554 S1_NUM_ID3_ORIG = 569 S1_NAME2_ID5 = 556 S1_NAME2_ID3 = 567 S1_NUM2_ID5_ORIG = 556 S1_NUM2_ID3_ORIG = 567 S1_SQ2 = CGGAAUUACUGG S1_SQLEN2 = 12 S1_SQ = AUCGGAAUUACUGGGC S1_SQLEN = 16 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 20 S2_NAME_ID3 = 29 S2_NUM_ID5_ORIG = 20 S2_NUM_ID3_ORIG = 29 S2_NAME2_ID5 = 22 S2_NAME2_ID3 = 27 S2_NUM2_ID5_ORIG = 22 S2_NUM2_ID3_ORIG = 27 S2_SQ2 = GCUCAG S2_SQLEN2 = 6 S2_SQ = UGGCUCAGAU S2_SQLEN = 10 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 881 S3_NAME_ID3 = 887 S3_NUM_ID5_ORIG = 881 S3_NUM_ID3_ORIG = 887 S3_NAME2_ID5 = 883 S3_NAME2_ID3 = 885 S3_NUM2_ID5_ORIG = 883 S3_NUM2_ID3_ORIG = 885 S3_SQ2 = CUG S3_SQLEN2 = 3 S3_SQ = GCCUGGG S3_SQLEN = 7 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 910 S4_NAME_ID3 = 915 S4_NUM_ID5_ORIG = 910 S4_NUM_ID3_ORIG = 915 S4_NAME2_ID5 = 912 S4_NAME2_ID3 = 913 S4_NUM2_ID5_ORIG = 912 S4_NUM2_ID3_ORIG = 913 S4_SQ2 = CA S4_SQLEN2 = 2 S4_SQ = CUCAAA S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 556 H1_OUTID2_ORIG = 27 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 90.13304637722744 H1_P_Y = -12.069485244896805 H1_P_Z = 6.049493880142496 # Orientation: H1_DX_X = -0.8122840269874985 H1_DX_Y = 0.0332337199062227 H1_DX_Z = 0.5823145021053184 H1_DY_X = -0.4675897294846578 H1_DY_Y = -0.6338862084101446 H1_DY_Z = -0.6160747679201499 H1_DZ_X = 0.34864667556342965 H1_DZ_Y = -0.7727119739259916 H1_DZ_Z = 0.5304353881199484 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 16 H2_INID2 = 3 H2_OUTID2 = 14 H2_INID2_ORIG = 883 H2_OUTID2_ORIG = 567 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 62.65064217644489 H2_P_Y = 13.87175581398223 H2_P_Z = -11.712601237738523 # Orientation: H2_DX_X = 0.8985823857927855 H2_DX_Y = 0.2953168442962415 H2_DX_Z = -0.3245576334302509 H2_DY_X = -0.27531776364132554 H2_DY_Y = -0.19650471335934228 H2_DY_Z = -0.9410558042173154 H2_DZ_X = -0.34168673513391923 H2_DZ_Y = 0.9349726515264898 H2_DZ_Z = -0.09526970101271104 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 3 H3_OUTID2 = 5 H3_INID2_ORIG = 912 H3_OUTID2_ORIG = 885 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 81.69579442329655 H3_P_Y = -1.460678147678983 H3_P_Z = -21.03676849343126 # Orientation: H3_DX_X = 0.5170829443701308 H3_DX_Y = 0.7925818260245732 H3_DX_Z = -0.3231706634227045 H3_DY_X = 0.5210370348244595 H3_DY_Y = -0.5910179648694256 H3_DY_Z = -0.6158069287877019 H3_DZ_X = -0.6790770478987298 H3_DZ_Y = 0.15003937568904968 H3_DZ_Z = -0.7185697939379203 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 22 H4_OUTID2_ORIG = 913 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 90.65273511755186 H4_P_Y = 15.210259143296526 H4_P_Z = -12.03270318326784 # Orientation: H4_DX_X = -0.15773823554064847 H4_DX_Y = -0.5603145984824156 H4_DX_Z = -0.813121270030507 H4_DY_X = -0.9601680550849778 H4_DY_Y = 0.279353570963357 H4_DY_Z = -0.006236055191587653 H4_DZ_X = 0.2306424831700724 H4_DZ_Y = 0.7797494040507544 H4_DZ_Z = -0.5820609176363227 ############# END of Description of junction: j12