############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 141 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 39.51999777035121 H1_P_Y = 128.61157520500097 H1_P_Z = 14.19423519535136 # Orientation: H1_DX_X = 0.12019016154909679 H1_DX_Y = -0.7865042799544568 H1_DX_Z = 0.6057766442180696 H1_DY_X = 0.6275660023013643 H1_DY_Y = 0.5330052256350086 H1_DY_Z = 0.5675088917375923 H1_DZ_X = -0.7692302891997116 H1_DZ_Y = 0.31195584152098377 H1_DZ_Z = 0.5576453309395362 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 60.339618357777866 H2_P_Y = 119.28505544334435 H2_P_Z = 1.1723798031830812 # Orientation: H2_DX_X = -0.9381940867349741 H2_DX_Y = -0.3458364199266839 H2_DX_Z = 0.013748682402689116 H2_DY_X = -0.23714622743956681 H2_DY_Y = 0.613387657591332 H2_DY_Z = -0.7533374066949059 H2_DZ_X = 0.2520982396342717 H2_DZ_Y = -0.7100371484414865 H2_DZ_Z = -0.657490475525221 ############# END of Description of junction: j4