#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 10:74:77:79:88:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.49195007329357
H1_P_Y = 126.50995089423492
H1_P_Z = 37.10259155527635
# Orientation:
H1_DX_X = -0.2042246524229654
H1_DX_Y = -0.9283115034355518
H1_DX_Z = 0.3106928449963675
H1_DY_X = -0.5862313989889856
H1_DY_Y = -0.13820095174520475
H1_DY_Z = -0.7982689044276583
H1_DZ_X = 0.7839802536940184
H1_DZ_Y = -0.34516409072489296
H1_DZ_Z = -0.5159813100218997
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.202298966805486
H2_P_Y = 143.6138439537105
H2_P_Z = 56.21876718341311
# Orientation:
H2_DX_X = -0.6458144439712328
H2_DX_Y = 0.4124491043397427
H2_DX_Z = 0.6425024827092045
H2_DY_X = 0.2442084283619863
H2_DY_Y = -0.6857294934482354
H2_DY_Z = 0.6856655929330273
H2_DZ_X = 0.723385061689207
H2_DZ_Y = 0.5997172651713356
H2_DZ_Z = 0.3421304639758347
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.33467442915806
H3_P_Y = 170.95074449411072
H3_P_Z = 66.37151067306955
# Orientation:
H3_DX_X = -0.7223542257150903
H3_DX_Y = 0.6764379930062603
H3_DX_Z = -0.14365240759981646
H3_DY_X = -0.34393789095508254
H3_DY_Y = -0.17121723000119005
H3_DY_Z = 0.9232504466915117
H3_DZ_X = 0.5999259118899047
H3_DZ_Y = 0.7163213676614646
H3_DZ_Z = 0.35633214628305154
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.673539580504976
H4_P_Y = 140.83795578272824
H4_P_Z = 69.30565849408325
# Orientation:
H4_DX_X = -0.7713925677530717
H4_DX_Y = -0.6241978252868705
H4_DX_Z = -0.12381672472842808
H4_DY_X = 0.5782838030834725
H4_DY_Y = -0.7688038347776853
H4_DY_Z = 0.27299909655977217
H4_DZ_X = -0.26559621515870546
H4_DZ_Y = 0.13898826762820704
H4_DZ_Z = 0.9540130564908793
#############  END of Description of junction: j1