############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:40:40:43:62:65:65:77:92:101:102:105:117:123:130:133:135:141:144:157:166 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.71376058582924 H1_P_Y = 90.96626358989776 H1_P_Z = 80.71870072906131 # Orientation: H1_DX_X = 0.14296526160242706 H1_DX_Y = -0.9860109874724685 H1_DX_Z = 0.08569286177102242 H1_DY_X = 0.22245432808510657 H1_DY_Y = -0.0523542625426785 H1_DY_Z = -0.9735363902339884 H1_DZ_X = 0.9644039640581923 H1_DZ_Y = 0.15824463269625255 H1_DZ_Z = 0.21185757086230694 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.878858323036674 H2_P_Y = 83.27061424279411 H2_P_Z = 70.61889517617374 # Orientation: H2_DX_X = -0.3997356704011352 H2_DX_Y = 0.4290221565844803 H2_DX_Z = 0.8100317172608555 H2_DY_X = -0.3670152323574811 H2_DY_Y = 0.7348655233055581 H2_DY_Z = -0.570326644892603 H2_DZ_X = -0.8399471489484043 H2_DZ_Y = -0.5252738826711862 H2_DZ_Z = -0.1362942961278577 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.270865097168304 H3_P_Y = 89.14018629584494 H3_P_Z = 98.01094388828609 # Orientation: H3_DX_X = -0.1969996848823854 H3_DX_Y = 0.9232933285312868 H3_DX_Z = 0.32972799948723264 H3_DY_X = -0.762755365908923 H3_DY_Y = -0.3556344192398342 H3_DY_Z = 0.5401188865695161 H3_DZ_X = 0.615950790188144 H3_DZ_Y = -0.1450985504460789 H3_DZ_Z = 0.7743068091687206 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 32.835595780087395 H4_P_Y = 101.46091650915876 H4_P_Z = 104.07945121036701 # Orientation: H4_DX_X = -0.9826432994623033 H4_DX_Y = 0.17414244068407925 H4_DX_Z = 0.06392617910086074 H4_DY_X = -0.05744165159632075 H4_DY_Y = -0.6133066575176969 H4_DY_Z = 0.7877533881275127 H4_DZ_X = 0.17638764889790082 H4_DZ_Y = 0.7704085631644233 H4_DZ_Z = 0.612664706931298 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.07157156016386 H5_P_Y = 96.71987538924209 H5_P_Z = 94.21990126342763 # Orientation: H5_DX_X = -0.13792123260236266 H5_DX_Y = 0.9353456501540194 H5_DX_Z = -0.32573954063853705 H5_DY_X = -0.9746169922868599 H5_DY_Y = -0.06960935497187393 H5_DY_Z = 0.21278217981331693 H5_DZ_X = 0.1763503670059947 H5_DZ_Y = 0.3468184718817042 H5_DZ_Z = 0.9212043723400853 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 9.954253233424303 H6_P_Y = 89.66080985925348 H6_P_Z = 73.02161833701986 # Orientation: H6_DX_X = 0.7108067783194585 H6_DX_Y = -0.6692864420213738 H6_DX_Z = 0.21635476057042524 H6_DY_X = -0.7013835485292645 H6_DY_Y = -0.6976203327798487 H6_DY_Z = 0.14624291143373114 H6_DZ_X = 0.053055082203306014 H6_DZ_Y = -0.25569812243836054 H6_DZ_Z = -0.9652997609208711 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.776093636608994 H7_P_Y = 99.5093594333376 H7_P_Z = 77.66281237804634 # Orientation: H7_DX_X = 0.9590819004076465 H7_DX_Y = -0.2176633528852676 H7_DX_Z = -0.18106510740945225 H7_DY_X = -0.27221972012351614 H7_DY_Y = -0.8847222302051279 H7_DY_Z = -0.37836886679106385 H7_DZ_X = -0.07783528946648133 H7_DZ_Y = 0.412176224680195 H7_DZ_Z = -0.9077733348815968 ############# END of Description of junction: j13