#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS4HS6
FINGERPRINT = 149
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  19
S1_NAME_ID3 = 28
S1_NUM_ID5_ORIG =  19
S1_NUM_ID3_ORIG = 28
S1_NAME2_ID5 =  21
S1_NAME2_ID3 = 26
S1_NUM2_ID5_ORIG =  21
S1_NUM2_ID3_ORIG = 26
S1_SQ2 = GAAACA
S1_SQLEN2 = 6
S1_SQ = GAGAAACACA
S1_SQLEN = 10
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  34
S2_NAME_ID3 = 45
S2_NUM_ID5_ORIG =  34
S2_NUM_ID3_ORIG = 45
S2_NAME2_ID5 =  36
S2_NAME2_ID3 = 43
S2_NUM2_ID5_ORIG =  36
S2_NUM2_ID3_ORIG = 43
S2_SQ2 = GUACAUUA
S2_SQLEN2 = 8
S2_SQ = UGGUACAUUACC
S2_SQLEN = 12
S2_CHAR = D
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 21
H1_OUTID2_ORIG = 43
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = D
# Position:
H1_P_X = 20.995840373191886
H1_P_Y = 30.244531626662443
H1_P_Z = 44.92945766346531
# Orientation:
H1_DX_X = 0.10976145472871224
H1_DX_Y = -0.03580993526466969
H1_DX_Z = -0.9933126756425565
H1_DY_X = -0.9259021523035749
H1_DY_Y = -0.3671108031596759
H1_DY_Z = -0.08907784552324927
H1_DZ_X = -0.3614659422621287
H1_DZ_Y = 0.9294876581965958
H1_DZ_Z = -0.07345111193684062
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 36
H2_OUTID2_ORIG = 26
H2_INSEQ_CHAR = D
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 41.97320182814988
H2_P_Y = 6.008439802304535
H2_P_Z = 40.9203482711189
# Orientation:
H2_DX_X = -0.4258498486877542
H2_DX_Y = -0.5320206830429024
H2_DX_Z = 0.7318510088721482
H2_DY_X = -0.4441365152058552
H2_DY_Y = -0.5817904382734849
H2_DY_Z = -0.6813682130789118
H2_DZ_X = 0.7882859013285852
H2_DZ_Y = -0.615202307170664
H2_DZ_Z = 0.011465557922633707
#############  END of Description of junction: j1