############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS19 FINGERPRINT = 131 LOOP_LENGTH_SUM = 22 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 53 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 53 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 55 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 55 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = ACGCGAUUACCUGCGAAAAGC S1_SQLEN2 = 21 S1_SQ = GGACGCGAUUACCUGCGAAAAGCCC S1_SQLEN = 25 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 106 S2_NAME_ID3 = 114 S2_NUM_ID5_ORIG = 106 S2_NUM_ID3_ORIG = 114 S2_NAME2_ID5 = 108 S2_NAME2_ID3 = 112 S2_NUM2_ID5_ORIG = 108 S2_NUM2_ID3_ORIG = 112 S2_SQ2 = GAUGU S2_SQLEN2 = 5 S2_SQ = GGGAUGUCC S2_SQLEN = 9 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 55 H1_OUTID2_ORIG = 112 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 2.3785425958898205 H1_P_Y = 170.35526041909552 H1_P_Z = 122.91796774911627 # Orientation: H1_DX_X = 0.6860568221792382 H1_DX_Y = -0.11797797980406699 H1_DX_Z = 0.7179186813439884 H1_DY_X = 0.5411612154772207 H1_DY_Y = -0.5767897840757428 H1_DY_Z = -0.611929803040411 H1_DZ_X = 0.48628240314095583 H1_DZ_Y = 0.8083283622805766 H1_DZ_Z = -0.33186545937812184 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 108 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = -23.195711275473002 H2_P_Y = 163.56138775546614 H2_P_Z = 117.7176459331214 # Orientation: H2_DX_X = -0.3600067355458485 H2_DX_Y = 0.9019339843081582 H2_DX_Z = 0.23855866848980156 H2_DY_X = 0.08170522694027582 H2_DY_Y = 0.2852014581376068 H2_DY_Z = -0.9549787349291279 H2_DZ_X = -0.9293650554288497 H2_DZ_Y = -0.3243072867300043 H2_DZ_Z = -0.17636716679007236 ############# END of Description of junction: j1