############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS12HS6HS14 FINGERPRINT = 18:65:75:99:109:173 LOOP_LENGTH_SUM = 32 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 237 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 237 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 239 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 239 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UCCCAUCAGCUAGU S1_SQLEN2 = 14 S1_SQ = CGUCCCAUCAGCUAGUUG S1_SQLEN = 18 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 113 S2_NAME_ID3 = 124 S2_NUM_ID5_ORIG = 113 S2_NUM_ID3_ORIG = 124 S2_NAME2_ID5 = 115 S2_NAME2_ID3 = 122 S2_NUM2_ID5_ORIG = 115 S2_NUM2_ID3_ORIG = 122 S2_SQ2 = GAGUAACG S2_SQLEN2 = 8 S2_SQ = GUGAGUAACGCG S2_SQLEN = 12 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 272 S3_NAME_ID3 = 291 S3_NUM_ID5_ORIG = 272 S3_NUM_ID3_ORIG = 291 S3_NAME2_ID5 = 274 S3_NAME2_ID3 = 289 S3_NUM2_ID5_ORIG = 274 S3_NUM2_ID3_ORIG = 289 S3_SQ2 = AGGCGACGACGGGUAG S3_SQLEN2 = 16 S3_SQ = CAAGGCGACGACGGGUAGCC S3_SQLEN = 20 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 309 S4_NAME_ID3 = 314 S4_NUM_ID5_ORIG = 309 S4_NUM_ID3_ORIG = 314 S4_NAME2_ID5 = 311 S4_NAME2_ID3 = 312 S4_NUM2_ID5_ORIG = 311 S4_NUM2_ID3_ORIG = 312 S4_SQ2 = CC S4_SQLEN2 = 2 S4_SQ = GGCCAC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 12 H1_INID2 = 3 H1_OUTID2 = 10 H1_INID2_ORIG = 239 H1_OUTID2_ORIG = 122 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 124.91335654277499 H1_P_Y = 77.72679631067005 H1_P_Z = -17.354417553039188 # Orientation: H1_DX_X = 0.3134981701458912 H1_DX_Y = 0.3943218299851452 H1_DX_Z = 0.8638455832568326 H1_DY_X = -0.19222338701892738 H1_DY_Y = 0.917223847528021 H1_DY_Z = -0.3489277618775297 H1_DZ_X = -0.9299296031410904 H1_DZ_Y = -0.05666310901325744 H1_DZ_Z = 0.36334587554946296 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 18 H2_INID2 = 3 H2_OUTID2 = 16 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 125.0080693997908 H2_P_Y = 61.03770221860021 H2_P_Z = -37.78618478076104 # Orientation: H2_DX_X = -0.10180437903673578 H2_DX_Y = 0.9831872536735133 H2_DX_Z = -0.15158724426174786 H2_DY_X = -0.6237075837205737 H2_DY_Y = -0.18179282995215829 H2_DY_Z = -0.7602237940155661 H2_DZ_X = -0.7749998183344076 H2_DZ_Y = 0.01715200256265348 H2_DZ_Z = 0.6317286525001933 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 20 H3_INID2 = 3 H3_OUTID2 = 18 H3_INID2_ORIG = 311 H3_OUTID2_ORIG = 289 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 135.66365328309726 H3_P_Y = 79.18473905252826 H3_P_Z = 1.131828996077239 # Orientation: H3_DX_X = -0.39127973050435116 H3_DX_Y = 0.35725414654874044 H3_DX_Z = -0.8480976637570596 H3_DY_X = -0.8372607950812494 H3_DY_Y = 0.24430624617377816 H3_DY_Z = 0.48919200637419524 H3_DZ_X = 0.38196142935692023 H3_DZ_Y = 0.901489840682757 H3_DZ_Z = 0.20352280862205463 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 3 H4_OUTID2 = 4 H4_INID2_ORIG = 115 H4_OUTID2_ORIG = 312 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 128.10163227133444 H4_P_Y = 64.36829579091231 H4_P_Z = -1.2112787713932125 # Orientation: H4_DX_X = 0.7187911129271924 H4_DX_Y = -0.27915607789437047 H4_DX_Z = -0.6367191061618138 H4_DY_X = 0.5505954348079172 H4_DY_Y = -0.3306070654302147 H4_DY_Z = 0.7665139499424067 H4_DZ_X = -0.4244808631087551 H4_DZ_Y = -0.9015380482610027 H4_DZ_Z = -0.0839353584146525 ############# END of Description of junction: j3