############# Start of Description of junction: j8 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 134 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 370 S1_NAME_ID3 = 378 S1_NUM_ID5_ORIG = 370 S1_NUM_ID3_ORIG = 378 S1_NAME2_ID5 = 372 S1_NAME2_ID3 = 376 S1_NUM2_ID5_ORIG = 372 S1_NUM2_ID3_ORIG = 376 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = CGCAAUGGG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 385 S2_NAME_ID3 = 391 S2_NUM_ID5_ORIG = 385 S2_NUM_ID3_ORIG = 391 S2_NAME2_ID5 = 387 S2_NAME2_ID3 = 389 S2_NUM2_ID5_ORIG = 387 S2_NUM2_ID3_ORIG = 389 S2_SQ2 = UGA S2_SQLEN2 = 3 S2_SQ = CCUGACG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 372 H1_OUTID2_ORIG = 389 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 133.8761124561378 H1_P_Y = 65.27989978789566 H1_P_Z = 19.024704969601846 # Orientation: H1_DX_X = -0.8081555218056451 H1_DX_Y = 0.569461709939759 H1_DX_Z = 0.1503263565963735 H1_DY_X = 0.08939136757999222 H1_DY_Y = -0.13368347315152107 H1_DY_Z = 0.9869842513476641 H1_DZ_X = 0.5821458889120947 H1_DZ_Y = 0.8110746512612934 H1_DZ_Z = 0.0571320759656011 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 387 H2_OUTID2_ORIG = 376 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.62227335754638 H2_P_Y = 60.47628354172845 H2_P_Z = 17.16251859164592 # Orientation: H2_DX_X = 0.4204768358008266 H2_DX_Y = -0.10020295364859777 H2_DX_Z = -0.9017530696565608 H2_DY_X = 0.12465567325348559 H2_DY_Y = -0.9780774605084446 H2_DY_Z = 0.16680960515232002 H2_DZ_X = -0.898699167508596 H2_DZ_Y = -0.18254821096206797 H2_DZ_Z = -0.3987680491136345 ############# END of Description of junction: j8