############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS2 FINGERPRINT = 80 LOOP_LENGTH_SUM = 2 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 247 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 247 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 249 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 249 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UAGU S1_SQLEN2 = 4 S1_SQ = GCUAGUUG S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 272 S2_NAME_ID3 = 277 S2_NUM_ID5_ORIG = 272 S2_NUM_ID3_ORIG = 277 S2_NAME2_ID5 = 274 S2_NAME2_ID3 = 275 S2_NUM2_ID5_ORIG = 274 S2_NUM2_ID3_ORIG = 275 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = CAAGGC S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 249 H1_OUTID2_ORIG = 275 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 138.82079279622684 H1_P_Y = 78.2785432830768 H1_P_Z = -42.251231191046294 # Orientation: H1_DX_X = -0.6690405986254291 H1_DX_Y = -0.18024225455179987 H1_DX_Z = 0.7210391161823537 H1_DY_X = 0.7350158418396973 H1_DY_Y = -0.016658011858183386 H1_DY_Z = 0.6778452794595751 H1_DZ_X = -0.11016528325950503 H1_DZ_Y = 0.9834811845251608 H1_DZ_Z = 0.14362579868998893 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 124.60435713303926 H2_P_Y = 60.99146920909265 H2_P_Z = -38.29068045555916 # Orientation: H2_DX_X = -0.12781710259702095 H2_DX_Y = 0.9810464651501363 H2_DX_Z = -0.14563866759943522 H2_DY_X = -0.6126384245879706 H2_DY_Y = -0.19357626991326526 H2_DY_Z = -0.7662913208727105 H2_DZ_X = -0.7799595816464375 H2_DZ_Y = -0.008721292501995492 H2_DZ_Z = 0.6257691188090249 ############# END of Description of junction: j9