#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 3HS2HS4HS1
FINGERPRINT = 38:64:73:79:108:109:115:118:126:172
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  105
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  105
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  107
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  107
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = GGACGG
S1_SQLEN2 = 6
S1_SQ = GCGGACGGGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 62
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 62
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 60
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 60
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = UGCAAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AG
S3_SQLEN2 = 2
S3_SQ = ACAGGG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 340
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 340
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 338
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 338
S4_SQ2 = CA
S4_SQLEN2 = 2
S4_SQ = CCCACU
S4_SQLEN = 6
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  349
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  349
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  351
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  351
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GCAG
S5_SQLEN2 = 4
S5_SQ = AGGCAGCA
S5_SQLEN = 8
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 107
H1_OUTID2_ORIG = 60
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 115.37477747983297
H1_P_Y = 44.32192626213437
H1_P_Z = 8.680930760980807
# Orientation:
H1_DX_X = -0.10760364687033075
H1_DX_Y = 0.8118626904302104
H1_DX_Z = 0.5738470415255481
H1_DY_X = -0.9482505990575305
H1_DY_Y = 0.08962702607497164
H1_DY_Z = -0.30461089537962494
H1_DZ_X = -0.2987344248111157
H1_DZ_Y = -0.5769280441132878
H1_DZ_Z = 0.7602050876890978
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 130.85641614039122
H2_P_Y = 70.14532393462092
H2_P_Z = -1.0709104613007647
# Orientation:
H2_DX_X = 0.8397155129842986
H2_DX_Y = -0.4178103570491203
H2_DX_Z = 0.3468607253581806
H2_DY_X = 0.3466349148002621
H2_DY_Y = -0.07926319562649553
H2_DY_Z = -0.9346451635034896
H2_DZ_X = 0.41799771900684846
H2_DZ_Y = 0.9050700809117274
H2_DZ_Z = 0.07826912254211638
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 133.4686155398623
H3_P_Y = 49.470324408926174
H3_P_Z = -8.09129958608969
# Orientation:
H3_DX_X = 0.6023572981766279
H3_DX_Y = 0.47324878727455655
H3_DX_Z = -0.642807335580839
H3_DY_X = -0.24380074416694697
H3_DY_Y = -0.6577381912904627
H3_DY_Z = -0.7127002657931332
H3_DZ_X = -0.7600834707300237
H3_DZ_Y = 0.5860171132834822
H3_DZ_Z = -0.28081499329964466
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 351
H4_OUTID2_ORIG = 338
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 144.5251697939011
H4_P_Y = 37.49775606488166
H4_P_Z = -3.485005388099887
# Orientation:
H4_DX_X = 0.43667812837415454
H4_DX_Y = 0.6918354905594057
H4_DX_Z = 0.5750442297789737
H4_DY_X = -0.6125218345057704
H4_DY_Y = -0.23951114791003647
H4_DY_Z = 0.7532937091735836
H4_DZ_X = 0.658884826394825
H4_DZ_Y = -0.6811740335841066
H4_DZ_Z = 0.3191750640595643
## Properties of helix 5
H5_INID = 1
H5_OUTID = 8
H5_INID2 = 3
H5_OUTID2 = 6
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 142.16381899812825
H5_P_Y = 55.2596293350888
H5_P_Z = 9.662112184047484
# Orientation:
H5_DX_X = -0.3626111205674931
H5_DX_Y = 0.5571519383335968
H5_DX_Z = 0.7470574896565267
H5_DY_X = 0.2958721313860053
H5_DY_Y = -0.6913190979042056
H5_DY_Z = 0.6591946501163548
H5_DZ_X = 0.8837266868833922
H5_DZ_Y = 0.4600648024833234
H5_DZ_Z = 0.0858342612601497
#############  END of Description of junction: j1