############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS3 FINGERPRINT = 143 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 638 S1_NAME_ID3 = 646 S1_NUM_ID5_ORIG = 638 S1_NUM_ID3_ORIG = 646 S1_NAME2_ID5 = 640 S1_NAME2_ID3 = 644 S1_NUM2_ID5_ORIG = 640 S1_NUM2_ID3_ORIG = 644 S1_SQ2 = AUACG S1_SQLEN2 = 5 S1_SQ = GGAUACGCU S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 593 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 593 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 595 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 595 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = GCGU S2_SQLEN2 = 4 S2_SQ = GGGCGUCC S2_SQLEN = 8 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 640 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 116.5484035729497 H1_P_Y = 100.56492058693776 H1_P_Z = -18.845320465178467 # Orientation: H1_DX_X = 0.15130842215795326 H1_DX_Y = 0.9590277306931796 H1_DX_Z = 0.2395236379682757 H1_DY_X = -0.9744632280282133 H1_DY_Y = 0.10404527015785447 H1_DY_Z = 0.19898743422290366 H1_DZ_X = 0.1659131658576456 H1_DZ_Y = -0.2635154521451568 H1_DZ_Z = 0.9502801838804302 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 595 H2_OUTID2_ORIG = 644 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 122.65417155566908 H2_P_Y = 111.51953913911812 H2_P_Z = -38.90313199394299 # Orientation: H2_DX_X = 0.18427171191194702 H2_DX_Y = -0.9827583086935903 H2_DX_Z = 0.015167164624877216 H2_DY_X = -0.8826921616182091 H2_DY_Y = -0.17225694464437424 H2_DY_Z = -0.43724374534069455 H2_DZ_X = 0.43231757309507657 H2_DZ_Y = 0.06718371614836371 H2_DZ_Z = -0.8992151379273423 ############# END of Description of junction: j9