#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 3HS2HS4HS1
FINGERPRINT = 36:63:73:82:108:109:117:119:128:170
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  105
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  105
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  107
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  107
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = GGACGG
S1_SQLEN2 = 6
S1_SQ = GCGGACGGGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 62
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 62
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 60
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 60
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = UGCAAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AG
S3_SQLEN2 = 2
S3_SQ = ACAGGG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 340
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 340
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 338
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 338
S4_SQ2 = CA
S4_SQLEN2 = 2
S4_SQ = CCCACU
S4_SQLEN = 6
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  349
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  349
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  351
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  351
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GCAG
S5_SQLEN2 = 4
S5_SQ = AGGCAGCA
S5_SQLEN = 8
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 107
H1_OUTID2_ORIG = 60
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 115.46695636646298
H1_P_Y = 44.544763893580075
H1_P_Z = 8.676186212254397
# Orientation:
H1_DX_X = -0.13211975667866227
H1_DX_Y = 0.7941244307717739
H1_DX_Z = 0.5932206658121224
H1_DY_X = -0.9439621410554793
H1_DY_Y = 0.08181136781066556
H1_DY_Z = -0.3197536181982983
H1_DZ_X = -0.3024563541225831
H1_DZ_Y = -0.6022236200518449
H1_DZ_Z = 0.7388144999270949
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 131.25098880775278
H2_P_Y = 70.29968910403619
H2_P_Z = -0.9227450242635495
# Orientation:
H2_DX_X = 0.8298876266515833
H2_DX_Y = -0.43685652625538296
H2_DX_Z = 0.3470488475685578
H2_DY_X = 0.3445722614919191
H2_DY_Y = -0.08791753689550319
H2_DY_Z = -0.9346338659157138
H2_DZ_X = 0.4388125838452481
H2_DZ_Y = 0.8952244870278605
H2_DZ_Z = 0.07756696516406192
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 133.99338234661505
H3_P_Y = 49.76544628867727
H3_P_Z = -7.776222952210484
# Orientation:
H3_DX_X = 0.5894385996779761
H3_DX_Y = 0.47436440128410595
H3_DX_Z = -0.6538658516882885
H3_DY_X = -0.23665713957456092
H3_DY_Y = -0.6725107091591198
H3_DY_Z = -0.7012294520017592
H3_DZ_X = -0.7723700767754167
H3_DZ_Y = 0.5680737283668975
H3_DZ_Z = -0.28414204835128754
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 351
H4_OUTID2_ORIG = 338
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 144.9459965662114
H4_P_Y = 37.84403072869395
H4_P_Z = -3.0137383271917804
# Orientation:
H4_DX_X = 0.43217058437653577
H4_DX_Y = 0.6812348374703205
H4_DX_Z = 0.590887199232188
H4_DY_X = -0.6223235538677443
H4_DY_Y = -0.24890900733691979
H4_DY_Z = 0.7421305143759866
H4_DZ_X = 0.6526423065516553
H4_DZ_Y = -0.6884499998426463
H4_DZ_Z = 0.316377333915673
## Properties of helix 5
H5_INID = 1
H5_OUTID = 8
H5_INID2 = 3
H5_OUTID2 = 6
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 142.27746889055828
H5_P_Y = 55.60264530238322
H5_P_Z = 10.219916590562
# Orientation:
H5_DX_X = -0.36253058887893985
H5_DX_Y = 0.5657594006195907
H5_DX_Z = 0.740599671035346
H5_DY_X = 0.2916900207031574
H5_DY_Y = -0.685854644473693
H5_DY_Z = 0.6667235847606232
H5_DZ_X = 0.8851488597684067
H5_DZ_Y = 0.45773322717979426
H5_DZ_Z = 0.0836169168666494
#############  END of Description of junction: j1